Collinsella stercoris: LK434_06110
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Entry
LK434_06110 CDS
T07953
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cstc
Collinsella stercoris
Pathway
cstc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK434_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstc03400
]
LK434_06110
Enzymes [BR:
cstc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LK434_06110
DNA repair and recombination proteins [BR:
cstc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LK434_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UEA44724
LinkDB
All DBs
Position
complement(1423789..1424430)
Genome browser
AA seq
213 aa
AA seq
DB search
MPVISLTSKEVTFLAEQDYRLCHLMKYIGDLEYSRPESAFHSLAHSIIEQMLSMKAGRAI
ESRLRELCDGDYTPECIAGIPAENIKSCGMSFRKVQSLKTLAEYALANDLESLAELPDED
VYKTLVQLPGIGKWTCDMFLLFYLGRPDILPVEDGALRQAFEWLYGAPIVSKEVQAVVCS
LWRPYSSTAVRYLYRALNTGLVKEFAQPEMLWS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccagttatttcgctaacctcaaaagaagtgacgtttctcgccgagcaagactatcgc
ctatgtcatctgatgaagtatatcggcgaccttgaatacagtcggccggaatcggctttc
cacagccttgcgcattcgatcatagaacaaatgctttcgatgaaagcaggccgtgctatc
gaatctcgccttcgggagctgtgcgatggcgactatacgcccgaatgcatagctggcatc
cctgctgaaaacatcaagagctgcggcatgtcatttcgtaaggtgcagagcctcaagacg
cttgcggagtatgcactagccaacgatctcgaatcgttagccgagttgcctgatgaagat
gtctataaaacgctagttcagctccccggcatagggaaatggacttgcgacatgttcttg
ctgttttatcttggtcgtcccgatatattgcccgtagaggatggcgcgcttcgccaagcg
ttcgaatggctctatggcgctcctattgtcagcaaggaagttcaggcggtcgtttgctcg
ctatggcgtccatattcatcaacggcagtgcgatacctgtaccgcgccttgaatacgggg
ctcgtaaaagaattcgctcagcccgaaatgctttggtcgtaa
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