Collinsella stercoris: LK434_06255
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Entry
LK434_06255 CDS
T07953
Name
(GenBank) 2-hydroxyacyl-CoA dehydratase
Organism
cstc
Collinsella stercoris
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
HGD-D
Motif
Other DBs
NCBI-ProteinID:
UEA44752
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All DBs
Position
complement(1453203..1458020)
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AA seq
1605 aa
AA seq
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MADDMQNVQDAQAGCCGTCGAATCQDAPASSEGARVQASTPAAGGEVHVQASTPAAGGES
DLGASTPVACGDPAALQVPEGAIWNPQNADGQLHLGIDVGSTTVKLAVLNSANQIVYAKY
QRHHTDVRACARDLFVGAVSVLPEARMTCAITGSGGLLLSQWLGLEFVQEVIASKRAVET
LIPQTDVAIELGGEDAKIIYFDSGIEQRMNGTCAGGTGAFIDQMATLLHTDASGLNELAR
QAQTIYPIASRCGVFAKTDVQPLLNEGARPEDVAASIFQAVVTQTISGLACGRPIRGHVA
FLGGPLQYLSELRRRFYLTLNLDDEHIIVPENAHLFVASGAAMAHESGKLSQFGELIEAI
DALGDTQGDEVARLEPLFATPEDLECFRARHAQEVVPRGSLEGYQGRVFIGLDAGSTTMK
AAMVGEDGQLLHTWYGNNNGDILGTAKTIMADFYAHIPEGCSIGHVTTTGYGEALLIEAL
KADSGEIETVAHLRGARAFLPGVEFILDIGGQDMKCLRVRDGVIEHIMLNEACSSGCGSF
IESFAVSMNMDVRAFAAAALEAKNPVDLGSRCTVFMNSRVKQAQKEGATVGDIAAGLSYS
VIKNALFKVIKLRDPHEIGTQVIVQGGTFMSDATLRAFEQLTGVDAVRPDIAGCMGAYGA
ALLARDRAGADGTSTVLSAEQIAALTVEQKHARCGRCSNNCQLTINDFGGGRRFITGNRC
EKGAGHRKAKTEVPNLFAAKNKLLFDRECLSPEEAPRGTVGIPRALNMYENYPFWHAFFT
RLGFAVVPSDNSSKATYEAGIESMPSESVCYPAKLSHGHVMNLIDKDPDFIWMPCVRWER
KEDPSAGNCYNCPIVMSYPTALGLNIDDITEKHVEFMYPFVPYHDKIELKHRLYDLLAVE
RVADAEAGRGRVRGPKLTRTEIDDAVNAAYEADARFHQDIQTMGEEAIHWIEEHGGRGIV
LAGRPYHNDPEINHALPELIASFGFAVLTEDSVAHLVKPERPIRVVDQWMYHSRLYAAAR
LVTMRNDLDLVQMNSFGCGLDALTTDQVQEILEASGKIYTVLKIDEVSNLGAARIRIRSL
MAALKDQAAERAAEAAAAGDAFELGEASPVEPSVDAPAFATHKYALEAQRASKSAAYPKV
PFTQEMKDAGYTILCPQMAPIHFDLIKEVFRAGGYNLELLPSTDRGAVEAGLRYVNNDIC
YPSILVTGQIMEAIESGRYDLSKTAVVITQTGGGCRATNYIALIRKALRDSGHPDIPVIS
LSAVKLDESNPGFKLTVPLLKACVYSVLFGDLMMQMLYRCRPYEAEEGAANELFEDFMER
ARRLAPNFTRSSFTKLSRQAITAFDAMPLVGEGSKPRVGVVGEILVKFHPTANNHVVDVI
EAEGCEAVVPGLLDFFLYSMSNAQVQKNELGSSAVTRATMDAAIGLVDWMRKPVDEMLER
SDRFERPEPIAVMQEKARQILSLCNNMGEGWLLTAEMLDLIDHGAPNIICTQPFACLPNH
VVGKAVIKELRRQHPESNIVAVDYDPGASEVNQLNRIKLMISVAKENMRAGKGFVMEPIA
TIRRDSVTSRMKPHHLTSDAEVERVTRRLSRGLHWKRASKGDAEE
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatatgcagaacgtgcaggacgcccaggcgggatgctgcggcacatgcggg
gcggcgacgtgccaggatgcgcctgcctcgagtgagggagcgcgcgtgcaggcgtcgacc
ccggccgcaggcggggaggtgcacgtgcaggcgtcgaccccggctgcaggcggggagtcg
gacctgggcgcatcgacgcccgtcgcatgcggggatcccgctgcactccaggttcccgag
ggcgccatttggaatccccagaatgctgacgggcagctccacctgggcatcgacgtgggc
tccaccacggtcaagctcgccgtgctgaacagcgcgaaccagattgtgtacgccaagtac
cagcgccatcacaccgacgtgcgcgcctgcgcgcgcgatttgttcgtgggcgcggtgagc
gtgctgcccgaggcgcgcatgacctgcgcgatcaccggttccggcggcctgttgctctcg
cagtggctcggccttgagttcgtgcaggaggtcatcgccagcaagcgcgcggtggaaacg
ctcatcccgcagacggatgtggccatcgagctgggcggtgaggacgccaagatcatctac
ttcgactccggcatcgagcagcgcatgaacggcacgtgcgcaggcggcaccggcgcgttc
atcgaccagatggccacgctgctgcacaccgacgcctccggcctgaacgagctcgcccgc
caggcgcagaccatctaccccatcgccagccgctgcggcgtgttcgccaagaccgacgta
cagccgctgctcaacgagggcgcccgccctgaggacgtggccgcctccattttccaggct
gtggtgacgcagaccatctcgggcctcgcgtgcggccgccccattcgcgggcacgtggcg
ttcctcggcggccctctgcagtacctctccgagctgcgtcgccgcttctacctcacgctc
aacttggacgacgagcacatcatcgtgcccgagaacgcgcacctgttcgtggcgtcgggt
gccgccatggcgcacgagagcggcaagctctcgcagttcggcgagctcatcgaggccatc
gatgcgctgggcgacacccagggcgacgaggtcgcgcgcttggagccgctgtttgccacg
cccgaggacctggagtgctttcgtgctcgccatgcgcaggaggtcgtgccgcgcggtagc
ctcgagggctaccagggtcgtgtgttcattggcctggatgccggctccactacgatgaag
gccgccatggtgggcgaggacggccagctcctgcacacttggtacggcaataacaacggc
gacatcctgggcaccgccaagaccatcatggcggacttttacgcgcacatcccggagggc
tgctccattggccacgtgaccacgaccggttacggcgaggcgttgctcatcgaggcgctc
aaggccgattccggcgagatcgagaccgtcgcgcacctgcgcggcgcccgcgcgttcctg
cccggggtggagttcatcctcgacatcggcggccaggacatgaaatgcctgcgcgtgcgc
gacggcgtgatcgagcacatcatgctcaacgaggcgtgctccagcgggtgcggcagcttt
atcgagagcttcgccgtgtcgatgaacatggacgtgcgcgcctttgccgctgcggcgctc
gaggccaagaacccggtcgacctgggcagccgctgcaccgtctttatgaattcccgcgtg
aagcaggcgcaaaaggagggcgcgacggtgggcgacatcgccgccggcctgtcctactcc
gtcatcaagaacgccctgttcaaggtcatcaagctgcgcgacccgcacgagatcggcacc
caggtgatcgtccagggcggcacctttatgtccgacgccacgctgcgcgccttcgagcag
ctcaccggcgtcgacgccgtgcgccccgacatcgctggctgcatgggcgcctacggcgcg
gcgctactcgcccgtgaccgcgccggcgcggacggcacttccacggtcctttccgccgag
cagatcgccgcgctcaccgtcgagcaaaagcacgcgcgctgcggccgctgctccaacaac
tgccagctcaccatcaacgacttcggcggcgggcgtcgtttcattacgggcaaccgctgc
gagaagggcgcgggtcatcgcaaggcgaaaaccgaggtccccaacctgttcgccgccaag
aacaagctgctcttcgaccgcgagtgcctgagccccgaggaggccccgcgcggcacggtg
ggcattccgcgcgccctcaacatgtacgagaactacccgttctggcatgcgttcttcacg
cgcttgggctttgcggtggtgccctcggacaactcgagcaaggccacatacgaggcgggc
atcgagtccatgccgagcgagagcgtgtgctatccggccaaactctcccacggccacgtg
atgaatctcatcgacaaggacccggacttcatctggatgccctgcgtgcgctgggagcgc
aaggaggacccctcggcgggcaactgctacaactgtcccatcgtgatgagctaccccacg
gcgctcggcctgaacatcgacgatatcaccgagaagcacgtcgagttcatgtacccgttc
gtgccttaccacgacaagatcgagctcaagcaccgcctgtacgatttactcgcggtcgag
cgcgtggccgatgcggaggccggccgtgggcgcgtgcgcggacccaagctcacccgcacc
gagatcgacgacgccgtgaacgcggcgtacgaggccgacgcgcgcttccatcaggacatt
cagaccatgggcgaggaggccatccactggatcgaggagcacggcgggcgtggcatcgtg
cttgccggccgcccgtaccataacgaccccgagatcaaccacgccctgcccgagctcatc
gcgagctttggctttgccgtgctcaccgaggactcggtggcgcacctggtcaagcccgag
cgtcccatccgcgtggtggaccagtggatgtaccacagccgcctatacgccgccgcgcgc
ctggtgaccatgcgcaacgacctcgacctggtgcagatgaattcgttcggctgcggcctg
gacgcccttaccaccgaccaggtgcaggagatcttggaggcgtccggcaagatctacacg
gtgctcaagatcgacgaggtgtccaacctgggcgccgcgcgcatccgcatccgctcgctc
atggcagccctcaaggaccaggccgccgagcgcgccgccgaggcagcggcggcgggcgat
gcctttgagctgggcgaggcctcgccggtggagccctccgtcgatgcaccggcgttcgcc
acgcacaagtacgcgctggaggcccagcgcgcgagcaagagcgccgcgtaccccaaggtg
ccgttcacgcaggagatgaaggacgcgggttacaccatcttgtgcccgcagatggcaccc
atccacttcgacctcatcaaggaggtcttccgtgcgggcggctacaacctggagctgctc
ccgtccacggaccgcggtgccgtggaggccggcctgcgctacgtgaacaacgacatctgc
tacccgtccatcctagtcacgggccagatcatggaggccatcgagagtggccgctacgat
ctgtccaagaccgccgtggtgatcacccagaccggcggcggctgccgcgccaccaactac
atcgcgctcatccgcaaggcgctgcgcgattccgggcacccggatattccggtgatcagc
ctctccgccgtcaagctcgacgagagcaaccccggcttcaagctcaccgtgccgctgctc
aaggcatgcgtgtacagcgtgttgttcggcgacctcatgatgcagatgctctaccgatgc
cgcccctacgaggccgaggaaggcgccgccaacgagctgttcgaggacttcatggagcgg
gcgcgccgtctcgcgccgaacttcacgcggagcagcttcaccaagctgtcccgtcaggcc
atcaccgcgttcgacgccatgccgctggtgggcgagggctccaagccgcgcgtgggcgtg
gtgggagagatcctggtcaagttccaccccacggcgaacaaccacgtggtggacgtcatc
gaggctgaagggtgcgaggccgtggtgccgggcctgctcgacttcttcctgtactcgatg
agcaatgcacaggtgcagaagaatgagttgggcagctccgccgtgacgcgcgccaccatg
gacgctgccatcgggctggtggactggatgcgcaagcccgtggacgagatgctcgagcgc
agtgaccgcttcgagcggcccgagcccatcgcggtgatgcaggagaaggcgcgccagatc
ctgtcgctgtgcaacaacatgggcgaaggctggctgctcaccgccgagatgctcgacctg
atcgaccacggggcgccgaacatcatctgcacgcagccgttcgcgtgcctgcccaaccac
gtggtgggtaaggccgtgatcaaggagctgcgccgtcagcatcccgagagcaatatcgtg
gccgttgactacgacccgggtgcgagcgaggtcaatcagctcaaccgcatcaagctcatg
atctccgtggccaaggagaacatgcgcgcgggcaagggcttcgtgatggagccgatcgcg
accatccgccgcgactcggtgacgagccgcatgaagccgcatcacctcacgagcgatgcc
gaggtcgagcgcgtgacgcgccgtctgagccgcgggctgcactggaagcgcgcgagcaag
ggcgacgcggaggagtaa
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