Collinsella stercoris: LK434_06450
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Entry
LK434_06450 CDS
T07953
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cstc
Collinsella stercoris
Pathway
cstc03030
DNA replication
cstc03430
Mismatch repair
cstc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK434_06450
03430 Mismatch repair
LK434_06450
03440 Homologous recombination
LK434_06450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cstc03032
]
LK434_06450
03400 DNA repair and recombination proteins [BR:
cstc03400
]
LK434_06450
Enzymes [BR:
cstc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK434_06450
DNA replication proteins [BR:
cstc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LK434_06450
DNA repair and recombination proteins [BR:
cstc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LK434_06450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UEA44788
LinkDB
All DBs
Position
complement(1505347..1506678)
Genome browser
AA seq
443 aa
AA seq
DB search
MPESLAPNSLLARLDTQPRVRDFLARAVKSGRASHAYLFLGSPGSGKLDAAWALAQALLC
SNASAPGAVPAHAGAASERIAAAPDAAPAPAASPDVSHNWKNFEKSQSFSSYATNSSTPG
RSAAVANPGACAACDDCRRVARRTHPDVHYLAPESATGYLIAQTRDLLEDVALSPIRARC
KVYIIDRAEQLRANTANALLKTLEEPPANVTFILLGTSTDVMLPTIVSRCQCVPFRPLSL
EESTVAVEHATGQPAARCRMAVAVAGSPARAVEFLKSADRVAARRAMVRAVDALARADEA
DILASAKDLMGAIHAPLAEVKSTQQAILEQNQDYLSRGALKQLEDRNKRELNARERSGIM
EALASVRSLLRDVLMMVEGAQGSPVNDDVSDVVERIAACATTAGVMRALDAVAQAEARVA
RNVTPQLAVEVMLFDIRKALKCP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagtccctcgcacccaacagcctcctcgccaggctcgacacccagccgcgtgtg
cgcgacttcctcgctcgcgcggtcaagagcggccgcgcgagtcacgcgtatctcttcctg
ggctcgcccggttcgggaaagctcgacgccgcttgggccctcgctcaggcgctcctctgc
tcaaacgcgtcggcgcccggtgccgtgcctgcccacgccggcgccgcgtccgaacgcatc
gccgccgcgccggatgccgcgcccgccccggctgcctcccccgatgtgtcgcataactgg
aaaaacttcgagaaatcgcaaagtttttccagttatgcgaccaattcgtccactcccggg
cggtcggcggccgtggccaaccccggcgcttgcgccgcctgcgacgattgccgtcgcgtg
gcgcgccgaacgcacccggatgtgcactacctcgcgcccgagtcggccaccggctacctc
atcgcgcagacgcgcgacctgctcgaggacgtggcgctttcgcccatccgcgcccgctgc
aaggtctacatcatcgaccgggccgagcagctccgcgccaataccgccaacgccctgctc
aagacgctcgaggagccgccggccaacgtgacgttcatcctcttgggaacgagcacggac
gtcatgctccccaccatcgtgtcgcgttgccagtgcgtgccgttccgcccgctgtcgctc
gaggagtcgactgtcgccgtggagcacgccaccggacagccggccgcccgatgccgcatg
gcggtcgcggtggcgggcagccctgcccgcgcggtcgagtttctcaagtccgccgatcgt
gtggccgcccgccgagccatggtccgcgctgttgatgcgctcgcccgtgcggacgaggcc
gatatccttgcgagtgccaaggacctcatgggtgccattcacgccccgctcgccgaggtc
aaatcgacgcagcaggccatactcgagcaaaaccaggattatctttcgcgtggtgcttta
aagcagctggaagaccgcaataagcgcgagctgaacgcccgcgagcgttcgggtatcatg
gaagcgctggcgagcgtgcgctccttgcttcgcgacgtgctcatgatggtcgagggcgct
cagggctcgccggtcaacgacgatgtctcagacgttgtcgagcgtatcgccgcatgtgcc
accacggcgggcgtcatgcgcgcgcttgacgccgtggcgcaggcggaggctcgcgtcgcc
cgcaacgtcaccccccagctggccgtcgaggtcatgcttttcgatataaggaaggcgctg
aaatgcccatag
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