Collinsella stercoris: LK434_06640
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Entry
LK434_06640 CDS
T07953
Name
(GenBank) PTS sugar transporter subunit IIA
KO
K03491
probable licABCH operon transcriptional regulator
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cstc03000
]
LK434_06640
Transcription factors [BR:
cstc03000
]
Prokaryotic type
Other transcription factors
BglG family
LK434_06640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_11
PTS_EIIA_2
PRD
Mga
HTH_Mga
HTH_10
HTH_36
HTH_23
GerE
HTH_29
PTS_IIB
HTH_69
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UEA44824
LinkDB
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Position
complement(1542273..1543826)
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AA seq
517 aa
AA seq
DB search
MAIRSSDIVRALHAHPNGMQLVDLASELAVSERTIQRHITRTNEELSDLAHIERLNQGGY
RLVIEDGEAFSRYLDGHATSPAMPESPDERVYYLLNDLCTREDWVTLDTLAGALFVSRRT
VSNDLREVEKRLASFRLTLESKPYRGIRVTGTELDKRLCLASTPLITDGVWNVVAGMLDA
VYQAYRFDFRNDLELRMNLARHVAPLLVRLSYGLSVDNPLTEDIRMRFPLAWSMAVDASQ
ALQQMSGATVDMAETGYIALAFALAIERAGSSPSKKNILVVCASGAGSARLLEYRFKQQF
GRYLNEVLTCDIAAVASCDWSAIDYVFTTVPLEAEIPVPVCQISAFLDANDAGYVLEMLQ
TPAASCLLPYFSPELFWPHVEGSSKDEVLTKMLDAVGVVKGMGDEFKASVRERERIAPTA
FGNLVAMPHPVRACSDEPFVAVGLLDERIMWNAHEVQAVFLISFSDSIVDPDSFNAGMAT
LLTNADAIAELLRTRAFETLQAILLGRIAAPEGNTLR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgatcatccgatatcgttcgtgcgcttcatgcacatccaaatggaatgcaa
ctggtagatcttgcttcagagctcgcggtcagtgagcgaacgattcaaaggcacattacg
cgcaccaatgaggagctatccgatcttgcgcacatcgagcgtttgaatcagggcggatac
cgtctggtcatcgaagatggcgaggcgttttcgcggtatctcgatgggcacgcgacttcg
cccgcaatgccggaatctcccgatgagcgcgtgtattatctgctcaacgacttgtgtacg
cgcgaggactgggtaacgctcgatacgctcgccggtgcgctgttcgtttcccgccgcacc
gtctctaacgatttgcgtgaggtggagaagcgtctggcgtcgtttcgacttacgctcgaa
agcaagccctaccggggcattcgcgtgacgggaactgagctcgacaagcgtttgtgcctg
gcgagcaccccacttatcaccgatggcgtgtggaacgtggtggcggggatgctcgatgcc
gtgtatcaggcctatcgatttgatttcaggaatgacctcgagctgcggatgaatctcgcg
cgccatgttgcgcctttactcgttcggctctcgtatggcctgagcgtcgataaccctttg
acggaagacattcggatgcgcttcccgcttgcgtggtccatggcggtggatgcctcccag
gcgcttcagcagatgagcggcgcgactgtcgacatggcggaaacaggctacattgctctg
gcgtttgcgcttgccattgaacgtgcgggatccagcccgtcaaagaagaacatcctcgtg
gtgtgcgcatcgggcgcgggcagtgcccgcctgctcgagtatcgctttaagcagcaattc
ggacgatatcttaacgaggtgctcacgtgtgacattgcggcagttgcttcatgtgattgg
tctgcaatcgactacgtgttcacaacggttccgcttgaggcggaaattccggtgccggtc
tgtcaaatcagcgcgtttctcgatgcgaacgatgcaggatacgtgcttgagatgcttcag
acacccgccgcatcatgcctgcttccatatttttcgcccgagctcttttggccgcatgtt
gagggctcaagtaaggatgaagtcctcaccaaaatgctcgatgcggtcggtgtcgttaag
ggcatgggcgatgaattcaaggcgtcggtgcgcgagcgcgagcgcatcgcgcccacggct
tttggcaatcttgtggcgatgccgcatccggtccgcgcgtgcagcgatgagccgttcgtc
gccgttggccttctcgatgaacgcattatgtggaacgcgcacgaggtgcaggcggtgttt
ctcatttcattttccgactccatcgtcgatccagattctttcaacgccggcatggcgacg
ctgcttacgaacgcggatgcgattgccgagctgttgcgtacaagagcgtttgagacgcta
caagcgattctccttgggcgtatagccgctccggagggaaacacattgcggtag
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