Collinsella stercoris: LK434_06675
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Entry
LK434_06675 CDS
T07953
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cstc03000
]
LK434_06675
Transcription factors [BR:
cstc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LK434_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_36
TrmB
HTH_IclR
HTH_Crp_2
HTH_24
HTH_41
MarR_2
HTH_11
Rrf2
RP-C
Fe_dep_repress
LexA_DNA_bind
MarR
DUF4423
RepL
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
UEA44830
LinkDB
All DBs
Position
complement(1552344..1553075)
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AA seq
243 aa
AA seq
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MAMGARKQPLYDQLVDILSEKIEHEYRPGDLMPSERELSERYGLSRTTVRLALQELERLG
LVVRQHGRGTFVADRSAQTTNLMQAYSFTEQMRGMGRDPLTTILEFSEVEADKNLVEHMN
VRLGERLFKIKRLRSADAMPMMVERTYLPARKFLTLRRPMLEQKPLYDIIEQDFHEKINV
AEEEFFASIARPSDAHMLDISEGAPVLDLVRTTYNVHNEIVEYTLSVARADQFKYKVMHQ
RNV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggcgcgcgcaaacaaccgctctacgaccagcttgtcgacattctgtccgag
aagatcgagcatgagtaccgtccgggcgacttgatgccgtccgagcgcgagctctccgag
cgctacggcctctctcgcaccacggtgcgattggccctgcaggagctcgagcgcctgggg
ctcgttgttcgccagcatggtcgtggcacgtttgtggccgatcgctccgcccagaccacg
aacctgatgcaggcatacagctttaccgagcaaatgcgcggcatggggcgtgaccctttg
acgacgatcctcgagtttagcgaggttgaggccgataagaacctcgttgagcacatgaat
gtccgcctgggcgagcgcctgttcaaaatcaagcgcctgcgctctgcggacgccatgccc
atgatggtcgagcgcacctacttgcccgcgcgcaagttcctcacgctcaggcggcccatg
ctagagcaaaagcccctgtacgacatcatcgagcaggattttcacgagaagatcaacgtg
gctgaagaggagttcttcgccagcatcgctcgtccctccgatgcgcacatgctcgacatc
tccgagggcgcgccggtactcgatttggtgcgtacgacctacaacgttcacaatgagatc
gtggaatacacgctctcggtggcacgtgccgaccagttcaagtacaaggtcatgcatcag
cgcaacgtctaa
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