Collinsella stercoris: LK434_07700
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Entry
LK434_07700 CDS
T07953
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cstc
Collinsella stercoris
Pathway
cstc03420
Nucleotide excision repair
cstc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK434_07700
03430 Mismatch repair
LK434_07700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstc03400
]
LK434_07700
Enzymes [BR:
cstc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK434_07700
DNA repair and recombination proteins [BR:
cstc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK434_07700
MMR (mismatch excision repair)
Other MMR factors
LK434_07700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UEA46571
LinkDB
All DBs
Position
complement(1809290..1812115)
Genome browser
AA seq
941 aa
AA seq
DB search
MYAVPARPLVDIDILNPAQREAVLTTEGPLLVLAGAGSGKTRVLTFRIARMIGDLGIRPW
QILAITFTNKAAAEMRERLGAMLPDGGMRGMWVCTFHAMCVRILREDADLLGYTGQFTIY
DDDDSRRMVREIMTHLGIEQKQYPINMIRSKISTAKNAMIGPEEFIEKASSPQEQKAGQV
YLELERRLRAANAMDFDDLLVRTLELLRTRPEVLEKYQERFRYISVDEYQDTNHVQYEIA
NLLAAKYQNLMVVGDDDQSIYSWRGADISNILDFEEDFPKAKVVKLEQNYRSTGHILAAA
NAVVRNNSQRKEKRLFTDLGDGEKIQAYQASDERDEGRWIASEIEKLHVCGMSYDDMAVF
YRTNAQSRILEDMFLRAGVPYKIVGGTRFFDRAEIRDVMAYLKMIVNPADEMSVKRVINT
PRRGIGSTSIGRIEDLARQNACSFFQACEIAMAETGLFSAKVRNALGDFVNIVREGRRMD
GELKDVVEMIVDKSGLVQAFRAEATMEAESRAENIQEFLGVAAEFEETHEDIEGTLESLE
ELRAAGVAGVPVAAPAGATGVAVGATAGAPAGVAAGALAGATGVATGATVGAAAGSTGSL
ASATGVAAGIAGTPADTMDAAMASAAGALGAAFASPAMATATSAPNVAAMAAAEVERTYG
PLACKALPALLEWLALRSDLDALAGDTHAITMMTVHSAKGLEFPAVFVAGMEESIFPHVA
GWTDDDPAKLEEERRLAYVAITRARKRLFFTYAATRRTYGSTQANPRSRFVNEIPAEHIE
FSGIGSSGFSGTGWEKRGDRRGTFGSGQGSDMYGGRVFGSFTRSTPGTQRRTSISPDAGR
VGTGFASAFGEGSGSGAGRSRSTFGSGAPRPKKTNVSATVERKVDAAAAATTFAAGDRVS
HKTFGPGTVISAAGDMIEVQFERNGQTKKLMKGFAPIVKLT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgtgcccgcccgcccgctcgtggacatcgatatcctgaacccggctcagcgc
gaggcggtcctcaccaccgaaggcccgctgctcgtccttgcgggcgccggctcgggcaag
acgcgcgtgctgacgttccgcatcgcgcgcatgatcggcgacctgggcattcgcccttgg
cagatcctcgccatcaccttcaccaacaaggcagccgccgagatgcgcgagcgcttgggc
gccatgctgcccgacggcggcatgcgcggcatgtgggtctgcacgttccacgccatgtgc
gtgcgcatcttgcgcgaggacgccgacctgctgggctataccggccagttcaccatctac
gacgacgacgattcccgccgcatggtgcgcgagatcatgacgcacctgggcatcgagcaa
aagcagtacccaatcaacatgatccgctccaagatctccacggccaaaaacgccatgatc
ggcccggaggagttcatcgagaaggcgagctccccgcaggagcagaaggccggtcaggtg
tacctggaactggagcgccgtctgcgcgccgcgaacgccatggacttcgacgacctgctc
gtccgcacgctcgagctgctacgtacgcgccctgaggtgctggagaagtaccaggagcgc
ttccgctacatcagcgtcgacgagtaccaggacaccaaccacgtccagtacgagatcgcc
aacctgctcgccgccaagtaccagaacctcatggtcgtgggcgacgacgaccagtccatt
tactcctggcgcggcgcggacatctccaacatcctcgacttcgaggaggatttccccaag
gccaaggtggtcaagctggagcagaactaccgctccaccggccatatccttgccgccgcc
aacgccgtggtgcgcaacaactcacagcgcaaggagaagcgcctgttcaccgatttgggc
gacggcgagaagatccaggcgtaccaagcgagcgacgagcgcgacgaggggcgctggatc
gcctcggagatcgagaagctgcatgtctgcggcatgagctacgacgacatggccgttttc
tatcgcaccaatgcgcagtcccgtatcttggaagatatgttcctgcgtgcgggcgttccc
tacaagatcgtgggcggcacgcgattcttcgaccgcgccgagatccgcgacgtcatggcg
tatctcaagatgatcgtgaaccctgccgacgagatgagcgtcaagcgcgtgatcaacacc
ccgcggcgcggcatcgggtcgacgtccatcggccgtattgaggacctggcgcgccagaac
gcctgctcgttcttccaggcgtgcgagatcgccatggccgagacggggctgttctccgcc
aaggtgcgtaacgccctcggtgactttgtgaacatcgtccgcgaggggcgccgcatggac
ggcgagctcaaggacgtggtcgagatgatcgtggacaagagcggtctggtgcaggcgttc
cgtgccgaggccaccatggaggccgagagccgcgccgagaacatccaggaattcctgggc
gtcgccgcggaattcgaggagacgcacgaggatatcgagggcacgttggagagcctcgag
gagctgcgcgccgcgggcgtcgcgggcgtcccggtggctgcgccggcgggcgcgacgggt
gttgccgtgggtgccaccgcgggtgctccggcgggcgttgccgcgggcgccctggcgggc
gcgacgggcgttgctacgggtgccaccgtgggtgcggcggctggctccacgggttcgctg
gcaagcgcgacgggcgttgccgcaggcatagcgggtactccggcggacacgatggacgcc
gcgatggcgtctgccgccggtgcgcttggggcggcgtttgccagccctgccatggcgacc
gcgacctcagctcccaacgtcgcggccatggcagccgcagaggtcgagcgcacgtacggt
ccgctcgcctgcaaggcgctgccggcgctgctcgagtggctcgccctgcgctccgacctc
gatgcgcttgcgggcgacacgcacgccatcaccatgatgaccgtccactccgccaagggc
ttggagttcccggcggtgttcgttgccggcatggaggagagcatctttccgcacgttgcg
ggctggaccgacgacgaccccgccaagctggaggaggagcgccgcctggcctacgtcgcc
atcacgcgcgcgcgcaagcgcctgttcttcacgtacgccgccacgcgtcgtacctacggt
tccacgcaggccaacccgcgttcgcgctttgtgaacgagatccccgccgagcatatcgag
ttctccggcatcgggtcctcgggcttctcgggcacgggctgggaaaagcgtggcgaccgt
cggggcacgttcgggtccggccaagggtcggacatgtacggcgggcgggtgttcggctcg
ttcacgcgctcgacgccgggcacgcagcgccgcacgtccatcagccccgacgccggtcgt
gtgggtacggggttcgcgtcggcctttggcgagggctctggttccggtgccgggcgctcg
cgttcgacctttggctcgggcgcgccgcgtcccaagaagacgaacgtgtccgccacggtc
gagcgcaaggtcgatgccgcggcggctgccacgacgtttgccgccggggaccgcgtgagc
cacaagacgttcggcccgggcacggtcatctccgctgccggcgacatgatcgaggtccag
ttcgagcgcaacggccagaccaagaagctcatgaagggctttgcgcccattgtgaagctc
acgtag
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