Collinsella stercoris: LK434_08200
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Entry
LK434_08200 CDS
T07953
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cstc02000
]
LK434_08200
Transporters [BR:
cstc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LK434_08200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
DEAD
AAA_25
AAA_24
SbcC_Walker_B
AAA_18
MotA_N
Motif
Other DBs
NCBI-ProteinID:
UEA45109
LinkDB
All DBs
Position
complement(1946879..1948654)
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AA seq
591 aa
AA seq
DB search
MFKRFLSYYGPVKGLFIADTVCALVLAGIDLAFPSILRSLTNGLFTQGSAAILGALGYIA
AGLIGLYALRCACRYFVSAQGHIMGARMESRMREDLFDQYERFSFAYFDAHNSGDMMSRV
VNDLFDICEAAHHVPEWIIICGIEIIGAFAILFTISPVLASAMAAITAVFVVIMVRQNLR
MRAVFADNRRRISDVNARLQDSLAGMRVVKSFANERTERAKFRVSNDRYLDSKVAQYHVM
GRYQATSALMTGVLYVTIVVLGGYLVAAGQMTAVDMATFALYITLFATPIETLVNSTENF
QKAAAGFRRMDEVLRTAPDIQDKPDARPLEVREGAIEYRDVCFSYPDTEVGEGGTAPESP
VIDHMNLSIRPGETIALVGPSGGGKSTTCSLLPRFYDVASGSIRIDGQDVRDVTQESLRR
AIGLVQQDVYLFDGTLRDNIAYGRPGASDAEIEDAARKANIHDFIASLPEGYDTVVGERG
SRLSGGQKQRVAIARVFLKDPAILILDEATSALDNESEEAVQESLERLAADRTTIIIAHR
LSTIKNADEIATVERGRVVERGTHEELLVRGGTYARYYRMQFEGARARDVR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcggtttctttcttattatgggccggtcaaggggctctttattgcggatacg
gtgtgcgcgctggtgctggcggggatcgacctcgcgtttccgagcatcttgcgctcgctc
accaacgggttgttcacccaagggtcggcggcgattttgggtgcgctcggctacatcgcg
gcggggctcatcgggctctacgccctgcgctgcgcctgccgctactttgtgtccgcgcag
ggtcacatcatgggcgcccgcatggagtcccgcatgcgcgaggacctcttcgaccagtac
gagcgctttagcttcgcctactttgacgcacacaactccggcgacatgatgagccgcgta
gtcaacgacctgttcgacatctgcgaggcggcacaccacgtgcccgagtggatcatcatc
tgcggcatcgagatcatcggcgcgttcgcgatcctcttcaccatctccccggtgctcgcg
agcgccatggcggcgatcactgccgtgttcgtggtcatcatggtccgccagaacctgcgc
atgcgcgccgtgttcgcggataaccgccgccgcatctccgacgtgaacgcccggctccag
gactcgctggcgggcatgcgcgtggtcaagtcctttgcgaacgagcgcaccgagcgcgcc
aagttccgcgtgtccaacgaccgctacctcgactccaaggtcgcccagtaccacgtgatg
ggtcgctatcaggccacgagcgccctcatgacgggcgtgctgtacgtcaccatcgtggtg
ctcggcggctacctggtggccgccggtcagatgacggcggtggacatggccaccttcgcc
ctgtacatcacgctgttcgccacgcccatcgagacgctcgtgaactccacggagaacttc
caaaaggccgccgcgggcttccgccgcatggacgaggtcctacgcaccgcgcccgacatc
caggacaagccggacgcccgtccgctcgaggtccgcgagggcgccatcgagtaccgcgac
gtctgcttctcctatcccgataccgaggtgggcgagggcggcaccgcccccgagagccct
gtgatcgaccatatgaacctttccatccgccccggcgagaccatcgcgctggtgggtccc
tcgggtggcggcaagtccaccacctgctcgctgctgccgcgcttctacgacgtggcgagc
ggctccatccgcatcgacggtcaggacgtgcgcgacgtgacgcaggagagcctgcgccgc
gccatcggcctggtgcagcaggacgtctacctgttcgacggcaccctgcgcgacaacatc
gcctacggccgccccggcgcgagcgacgccgagatcgaggacgcggcccgcaaggccaac
atccacgacttcatcgcgagcctgcccgagggctacgacaccgtggtgggcgagcgcggc
agccgtctttccggcgggcaaaagcagcgcgtggccatcgcccgcgtgttcctcaaagac
ccggcgatcctcatcctggacgaggcgacctcggccctcgacaacgagagcgaggaggcc
gtgcaggagtcgcttgagcgcctggccgccgaccgcaccaccatcatcatcgcgcaccgc
ctgtccaccattaagaacgccgacgagatcgcgaccgtcgagcgtggcagggttgtggag
cgcggcacgcacgaggagcttctcgtgcgcggcggcacgtacgcccgctactatcgaatg
cagtttgagggcgcacgcgcgcgcgacgtgaggtag
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