Collinsella stercoris: LK434_08225
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Entry
LK434_08225 CDS
T07953
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
cstc
Collinsella stercoris
Pathway
cstc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK434_08225 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cstc03032
]
LK434_08225 (dnaB)
Enzymes [BR:
cstc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LK434_08225 (dnaB)
DNA replication proteins [BR:
cstc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LK434_08225 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
ParA
nSTAND3
DUF1611
DUF7125
IstB_IS21
KdpD
nSTAND_NTPase7
TerL_nuclease
Motif
Other DBs
NCBI-ProteinID:
UEA46576
LinkDB
All DBs
Position
complement(1955135..1956523)
Genome browser
AA seq
462 aa
AA seq
DB search
MVSNSWSQTGSTDLGAIKGLPNNTEAEGNVLAAMMLSGEVVEEALVELLPDDFYRPSHKT
IFTAMSGMYESSMPIDSISLIDYLRSIDKLEAVGGEAYILELMGNTLALAHWQHHAEIVR
RDAMLREIIGATNQISALAYDSPLDTKEVIERAESMLLSVTEREVKSSYKGLSDFMTEAY
QEAEEVARAGGDVHGAPTGYPSLDRMLMGLREGQLVVLGARPAVGKTSFALNLALNAAAD
GYTVGFFSLEMSGKEIAQRFICAQAMVNMSNFRTGRISPEEWANINEAIAELGRLDILID
DTPGTTVTEIRAKARRMLHNKERAVIILDYLQLVNPPAGKNYNGNRAVEVSEMSRGLKIM
AKELGVPVIMLSQLNRSLEGRTGKRPQMSDLRESGSIEQDADIVMLLDRSSTEAEAERED
RPDFGITRVIVAKNRSGPIGDVDLMFLPASTKFYEIDEHAVE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atcgtcagcaacagctggtcgcaaacgggttcgactgaccttggcgcgatcaagggcctg
cccaacaacaccgaggccgagggtaacgtcctcgccgcgatgatgctgtcgggcgaggtg
gtcgaggaggcgctcgtcgagctgctgcccgacgacttctatcgcccctcgcacaagacg
atctttaccgcgatgtccggcatgtacgagagcagcatgcccatcgactcgatctcgctc
atcgattacctgcgctccatcgacaagctcgaggccgtgggcggcgaggcgtacatcctg
gagctcatgggcaacacgctggcgctcgcccattggcagcatcatgccgagatcgtgcgg
cgcgacgccatgctgcgcgagatcatcggcgccaccaaccagatcagcgcccttgcctac
gactctccgctcgacaccaaggaggtcatcgagcgtgcggagtccatgttgctctccgtt
acggagcgcgaggtcaagagctcgtataagggcctttcggactttatgaccgaggcgtat
caagaggccgaggaggtggcccgcgccggtggcgacgtccacggcgcgcccacgggttac
cccagcctcgaccgcatgctcatgggcctgcgcgagggccagctcgtggttttgggcgcc
cgtccggccgtgggtaagacctcgttcgcgttgaacttggcgctcaacgcggcggcggat
ggttacaccgtgggctttttctccctggagatgtccggcaaggaaatcgcgcagcgcttt
atctgcgcgcaggccatggtgaacatgtccaacttccgcactggccgcatctcgcccgag
gagtgggcgaacatcaacgaggcgatcgccgagctcggccgcctcgacatccttatcgac
gacacccccggcaccacggtgaccgagattcgcgccaaggcgcgacgcatgctccacaac
aaggagcgcgccgtcatcatcctggactacctgcagctggtgaatccgccggcaggcaag
aactacaacggcaaccgtgccgtcgaggtgtccgagatgagccgtggcctcaagatcatg
gctaaagagttgggcgtccccgtcatcatgctgtcgcagctcaaccgttcgctcgagggc
cgtacgggcaagcgcccgcagatgagcgacttgcgcgaatcgggctccatcgagcaggac
gccgacatcgtcatgctgctggatcgttcgagcaccgaggccgaggccgagcgcgaggat
cgtccggactttggcatcacgcgcgtgatcgtggccaagaaccgttccggccccatcggc
gacgtcgacctgatgttcctgcccgcgtcgaccaagttctacgagatcgacgaacacgcg
gttgaatag
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