Collinsella stercoris: LK434_09225
Help
Entry
LK434_09225 CDS
T07953
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cstc
Collinsella stercoris
Pathway
cstc00900
Terpenoid backbone biosynthesis
cstc01100
Metabolic pathways
cstc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LK434_09225
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
LK434_09225
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cstc01006
]
LK434_09225
Enzymes [BR:
cstc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LK434_09225
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LK434_09225
2.5.1.29 geranylgeranyl diphosphate synthase
LK434_09225
Prenyltransferases [BR:
cstc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LK434_09225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UEA45293
LinkDB
All DBs
Position
complement(2181081..2182148)
Genome browser
AA seq
355 aa
AA seq
DB search
MSDANTNTGEAFVAYLREKLPLIERALHEANAAPMAEVDAPARDLDRYLYEPLAHFTAGG
GKRVRPVLALLGAEAVGGCAEQALSSGVAIELFQSAALIHDDIADASELRRGEPCLYRTH
GEGLAINAGDLALTRVFEVVLNDASLPGDRRLRVLDELVRMERHTLEGQALDLGWARDGR
WDVTSSDYLYMIEGKTAWYTVASPLRIGALAAGAADEAACELVELGRPAGLAFQLQDDLL
NLVGDASAQGKDFRSDITEGKRTLAVVWALEHLDDEPHRELVDLLESKTTNPDKLARAVE
LIEQGGGIEACRDLALKLTRDAQDKARALAASGTITPESAELLCSMADFFINRSA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcaaacaccaacacgggagaggccttcgtcgcatacttgcgcgagaagctg
ccgctcatcgagcgcgccctgcatgaggcgaacgccgcgcccatggcagaggtcgacgcc
cccgcgcgagacctcgaccggtacctgtacgagcccctcgcgcacttcaccgccggtggc
ggcaagcgcgtgcgccccgtcctcgccctgctgggagccgaggccgtgggaggctgcgcc
gagcaggcgctttcttccggcgtggccatcgagctgttccagagcgccgcgctcatccac
gacgacatcgccgatgccagcgagctgcgccgcggcgagccctgcctttaccgcacgcac
ggtgagggccttgccatcaacgccggcgaccttgccctcacgcgcgtgttcgaggtcgtc
ctgaacgatgcctccctgccgggcgatcgtcgcctgcgcgtccttgacgagctcgtgcgc
atggagcgccatacgctcgagggccaggcactcgacctaggctgggcgcgcgacggacgc
tgggatgtcacgagcagcgactacctgtacatgatcgagggcaagaccgcctggtacacc
gtggcgagccccctgcgcatcggagcgctggccgccggcgcggcggacgaggccgcctgt
gagctcgtcgagctgggacgccccgccggccttgccttccagctgcaagacgacctgctc
aacctcgtgggcgacgccagcgcccagggcaaggacttccgctccgacatcaccgagggc
aagcgcacgctcgccgtggtctgggcgctcgagcacctcgatgacgagccgcaccgtgag
ctcgtcgacctgttggaatccaagacaaccaacccggacaaactcgcgcgtgccgtggag
ctcatcgaacagggcggcggcatcgaggcgtgccgagatctcgccctcaagctcacgcgc
gacgcgcaggacaaggcacgcgccctcgccgcgtctggcaccatcacgcccgagtcggcc
gagctcctctgctccatggcggacttcttcatcaaccgcagcgcgtag
DBGET
integrated database retrieval system
