Collinsella stercoris: LK434_09965
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Entry
LK434_09965 CDS
T07953
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
cstc
Collinsella stercoris
Pathway
cstc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK434_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstc03400
]
LK434_09965
Enzymes [BR:
cstc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
LK434_09965
DNA repair and recombination proteins [BR:
cstc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LK434_09965
Prokaryotic type
LK434_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
HHH_8
RecR_HhH
DUF4743
MksE
Motif
Other DBs
NCBI-ProteinID:
UEA45431
LinkDB
All DBs
Position
2347431..2348531
Genome browser
AA seq
366 aa
AA seq
DB search
MNMDPFRTLVRTEGVRLYRDLPWRRTRDPYEIWLSEVMLQQTQVARVETRWAEWLDRFPS
VFALAEAGTAEVLAAWQGMGYNRRALALKAAAEEVVRTYDGVFPTGVKELTALPGIGPAT
AQGIRSFAFDLPGVYLETNVRTVLLHHLFPDVPSVPDKELVPLVRATCPDGGACVLENAL
GGGDAHGLMGASGGNDAHGLMGGSADGGARDGASGPVRCDARGGKGGVGRVPARGGVSSG
VRGEVNPFATPQDVQDTPRAWYYAMLDYGAYLKKTVPNPSRRAKAYTRQSRFEGSRRQKR
AEIVRQLLDTQARGEGRDLASLVTSLNALEQAAGRSAVERDLVSSILEDLAREGFCREQG
GVWRIA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaccccttccgtacgctggttcgaacggaaggagttcgtctgtatcgcgac
cttccgtggcggcgcacccgcgacccgtacgagatttggctgtccgaggtgatgctgcag
cagacgcaggtggcgcgtgtggagacgcgttgggcagagtggctcgacaggttcccgagt
gtgttcgcgctggccgaggcgggaactgccgaggtgctcgccgcgtggcagggcatgggg
tacaaccgccgtgcgctcgccctcaaggccgccgccgaggaggtcgtgcgcacgtatgac
ggcgtgtttcccacgggcgtcaaggagctgacggcgctgccgggcatagggcccgccacg
gctcaggggattcgatcgttcgcgttcgacctgccgggcgtgtatttggagaccaacgtg
cgcacggtgctgctgcaccatttgttcccggatgtcccgagcgtgcccgacaaggagctc
gtgccgctcgtgcgggcaacgtgcccggacggtggtgcgtgcgtcttggagaacgctttg
ggcggcggcgatgcgcatggcttgatgggcgcttcgggcggcaacgatgcgcatggcttg
atgggcggttcggctgatggcggcgcgcgtgacggcgcgagtgggccggttcgttgcgat
gcgcgcggcgggaagggcggcgtggggcgtgtacccgctcgcggcggggtctctagtggg
gtccgcggcgaggtgaatccctttgccactccccaagacgtgcaagacacgccgcgcgcc
tggtattacgccatgctggactacggtgcgtacctcaaaaagaccgtgcccaacccgtcc
cgccgcgccaaggcatacacgcgccagtcgcgctttgagggctcgcgacgccaaaaacgc
gccgagatcgtgcgtcagctgctggatacccaggcgcgcggcgaggggcgcgacctggcc
tcgctggtgacctcgctcaatgcgctcgagcaggcggcgggccgttcggccgtcgagcgc
gatctggtctcgtccatcttggaggatttggcccgtgagggcttttgccgggagcagggc
ggtgtgtggcgcatcgcgtag
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