Conchiformibius steedae: H3L98_01720
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Entry
H3L98_01720 CDS
T06730
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cste
Conchiformibius steedae
Pathway
cste03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H3L98_01720 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cste03021
]
H3L98_01720 (rpoA)
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_01720 (rpoA)
Enzymes [BR:
cste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H3L98_01720 (rpoA)
Transcription machinery [BR:
cste03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H3L98_01720 (rpoA)
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H3L98_01720 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QMT33777
LinkDB
All DBs
Position
complement(280106..281089)
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSTSEFLKPRQIDVDTLSATRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVN
IDGVLHEYSTLEGVQEDVVDILLNIKGVVFRLHGRTDVTVSLNKSGAGVVRAGDIELPHD
VEIINPDHVICHLADKGSIAMEIKVEQGRGYQPVSGRRQGKDHTKIGAIQLDASFSPISR
VSFDVEAARVEQRTDLDSLILDIETNGAIDPEEAVRTAARILIDQMSIFADLQGTPVEVE
EEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGSKLEAWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcacttccgaatttttgaaaccccgtcagattgacgtggatactttgtcc
gctacccgtgccaaagtgtccatgcagccttttgagcgcggtttcggtcatactttaggt
aatgctttgcgtcgtatcttactgtcatctatgaacggctttgccccgaccgaagtgaac
attgacggcgttttgcacgaatattccactttggaaggcgttcaggaggatgtggttgac
atccttctgaacatcaagggcgtggttttccgcttgcacgggcgcactgatgttaccgtg
agcctgaacaaatcgggcgcgggcgtggtgcgtgcaggcgacatcgagctgccgcacgat
gtggaaatcatcaatcccgaccacgttatctgccatttggcggataaaggcagcattgcc
atggaaatcaaggtggaacaaggacgtggttatcagcccgtttccggtcgccgccaaggt
aaggatcacaccaaaatcggtgctattcaattggatgcgagcttttcgcccatcagccgt
gtgagctttgatgtagaagcagcgcgtgtggaacagcgtaccgacttggacagcctgatt
ctcgacattgaaaccaatggtgcgattgaccccgaagaagccgtccgcacggcagcacgg
attttgattgaccaaatgtcgatttttgccgatttgcaaggcacaccagttgaggtggaa
gaagaaaaagcaccgccgattgaccctgtgctgctgcgtcccgttgatgatttggaactg
acggtgcgttcggcaaactgcctgaaagccgaagacatttattacatcggcgatttgatt
cagcgtaccgaaaccgagttgttgaaaaccccgaatttgggtcgcaagtctttgaacgaa
atcaaagaagtgttggcatcaaaaggtttgacactgggttcgaagctggaagcatggccg
cccgctggtttggaaaagccgtaa
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