Conchiformibius steedae: H3L98_02170
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Entry
H3L98_02170 CDS
T06730
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cste
Conchiformibius steedae
Pathway
cste03030
DNA replication
cste03410
Base excision repair
cste03420
Nucleotide excision repair
cste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L98_02170 (polA)
03410 Base excision repair
H3L98_02170 (polA)
03420 Nucleotide excision repair
H3L98_02170 (polA)
03440 Homologous recombination
H3L98_02170 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cste03032
]
H3L98_02170 (polA)
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_02170 (polA)
Enzymes [BR:
cste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L98_02170 (polA)
DNA replication proteins [BR:
cste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H3L98_02170 (polA)
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H3L98_02170 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L98_02170 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QMT33861
LinkDB
All DBs
Position
354116..356878
Genome browser
AA seq
920 aa
AA seq
DB search
MSMPTLLLVDGSSYLYRAFYAMTHLSAPDGTPTNAVYGVLNMLRRARAEIPHDYCACVFD
AKGQNFRHTLFADYKATRPPMPDDLRPQADLLPELVRLMGWTVLKTAGVEADDVIATLAK
QAEAQAWRVVISTGDKDMAQLVNEHITLVNTMSGETLDSAGVLEKFGVAPHQITDYLSLM
GDKVDNVPGVEKCGPKTAAKWLAQYSSLENLSANAEQIGGKVGEHLRLALPQLPLSKQLV
TLKTDVDLQNELPAGLHDLQRREPDWTALVEHFRRLGFKTWLKEAEQQQNGNASPELFAP
APVSQAAETTQATAPAAVHYRSITTESDFQALLARLNESDSIGIDTETTSLDAMNAQLVG
ISIAFAAGDAVYLPLAHNPALTLEQLDSNIVLPALKPHLENPALKKIGQNLKYDRHVFAN
HHIDLQGIAGDAMLASYIVESHLGHGLDELALRWLGLSTITYEDLCGKKGAKQIPFADVP
LAQACDYACQDADFALRIEAHLRTQMDERQLSLYQDMELPVSDVLFAMERAGVHIDQHEL
ARQSHELGHELLDLEQRAYTIAGQPFNLNSPKQLQEILFDKMGIATKGLKKTTSGGISTN
EAVLEQLAGEHELPQLILQHRSLAKLKSTYTDKLPEMISPHTGRVHTTYAQAVTVTGRLA
SSNPNLQNIPIRTEAGRRVRRAFTAPEGFAMVSADYSQIELRIMAHLSGDTTLIEAFQNG
EDIHRRTAAEVFGLTPEQVGAEQRRYAKTINFGLIYGMGQYGLAKALGIDNLSAKSFIDR
YFARYPGVAEYMQRTKEQANAQGYVETLFGRRLYLPDIHSRNANARAAAERAAINAPMQG
TASDLIKRAMIQVQQWLQNEQLSAKLVMQVHDELVLQVPENERAQVCQALPVLMAQAGEQ
VLNVPLPAEVGSGSNWESAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcctactttgcttttggttgacggttcatcttatctgtaccgcgccttttat
gccatgacccatctttctgcgcctgacggtacacccaccaatgccgtttacggcgtatta
aatatgttgcgccgcgcccgtgccgaaatcccccacgattattgtgcctgcgtatttgat
gccaaaggtcagaacttccgccacaccctgtttgccgattacaaagccacacgcccgccc
atgcccgatgatttgcgcccgcaagccgacctattgcccgaactggtgcgcctgatgggt
tggacggtactcaaaaccgcaggcgtggaagccgatgatgtgattgccacccttgccaaa
caagctgaagcccaagcatggcgcgtggtcatttccacaggcgataaagacatggcgcaa
ttggttaatgaacacatcacgctggtcaataccatgagcggcgaaaccttggacagcgcg
ggcgtgttggaaaaatttggcgttgcaccccatcagattaccgattatttgagtttgatg
ggcgataaagtggataatgtgccaggggtagaaaaatgtggtcccaaaaccgctgccaaa
tggctggcgcaatacagttctttggaaaacttgagcgcaaacgccgaacaaatcggcggt
aaagtaggcgaacacctgcgtcttgctttgccgcagctgcctttaagcaaacaactggtt
accctaaaaaccgatgtggatttgcaaaacgaattgcccgcaggtttgcatgatttacag
cggcgcgaacccgattggacggcattggtggaacacttccgccgtttgggttttaaaact
tggctgaaagaagccgagcagcagcaaaacggcaacgcttcccccgaactgtttgcccct
gcgcctgtttcacaagctgccgaaaccacccaagccactgcccccgccgccgtacactac
cgcagcatcaccaccgaatccgatttccaagccctgcttgcccgtctcaacgaaagcgac
agcatcggcattgacaccgaaaccacttctttagatgccatgaacgcccaattggtcggc
atcagcattgcctttgctgcgggcgatgccgtttacctgcctttggcgcacaatcccgcg
cttaccctcgaacagctcgacagcaatatcgttttacccgcgctcaagccccatttggaa
aatcccgcgctgaaaaaaatcggacaaaacctcaaatacgaccgtcatgttttcgccaat
caccacattgatttacagggcattgcgggcgatgccatgctggcatcgtatattgtagaa
agccatctcggacacggtttggacgaactagcattacgctggttgggtttaagcacgatt
acttatgaagatttatgcggtaaaaaaggcgcaaaacaaattccctttgccgatgtgcct
ttggcgcaagcctgcgattatgcctgtcaggatgctgattttgccctacgcattgaagcg
catttacgcacgcaaatggacgaacgccaattgtccttgtatcaagacatggaattgcct
gtgtcagatgtgctgtttgcgatggaacgcgcaggcgtacacattgaccaacacgagttg
gcacgccaaagccacgaattgggacatgaattgctggatttagaacaacgcgcttatacc
attgcaggacaaccgtttaatctaaattcgcccaagcaattgcaggaaattctgtttgat
aaaatgggtattgccaccaaagggctgaaaaaaaccacttcaggtggtatttccaccaat
gaagcggttttggaacaactcgccggcgaacacgaattgccgcagttgattttgcaacac
cgcagcttggcaaaactcaaatccacctataccgacaaactgcccgaaatgatttcgccg
catacggggcgcgtacataccacttacgcccaagccgttaccgttacggggcgtttggca
agcagcaatcccaatttacaaaatattccgattcgtaccgaagcaggacggcgcgtgcgc
cgtgcgtttactgcgcctgaaggttttgcaatggtgtcggcagactattcgcaaattgaa
ttgcgtattatggcgcacttaagcggcgacaccacattgattgaagcatttcaaaacggc
gaagacattcaccgccgcaccgctgcagaagttttcgggcttacccccgaacaagtgggc
gcggaacaacgccgttatgccaaaaccattaatttcggtttgatttacggcatgggtcaa
tacggtttggcaaaagcactgggcattgataatctgtccgccaagagttttattgaccgc
tattttgcccgttatcccggggttgccgaatacatgcagcgcaccaaagaacaagccaac
gcgcaaggttatgtggaaaccctgtttggcagacgtttgtatctgcccgatattcacagc
cgcaacgccaacgcccgcgccgccgccgaacgcgctgccatcaatgcacccatgcaaggc
acggcttccgatttaatcaaacgcgccatgattcaggtgcaacaatggctgcaaaacgaa
caactgtctgccaagctggtgatgcaggtacacgatgagttggtattgcaagtgcctgaa
aacgaacgcgcacaagtttgccaagccttgcctgtattgatggcacaagcaggcgaacag
gtattaaacgtccccctgcctgccgaagtgggcagcggcagcaattgggaatccgcccac
taa
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