Conchiformibius steedae: H3L98_04005
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Entry
H3L98_04005 CDS
T06730
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cste
Conchiformibius steedae
Pathway
cste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3L98_04005 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cste03019
]
H3L98_04005 (pcnB)
Enzymes [BR:
cste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
H3L98_04005 (pcnB)
Messenger RNA biogenesis [BR:
cste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H3L98_04005 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QMT34172
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All DBs
Position
719966..721291
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AA seq
441 aa
AA seq
DB search
MIKQWVKKKLARNAAAGEVRRSVDLIVEGTAAVSIIRKLVQAGYEAYLVGGAVRDLLLGV
QPKDFDVVTNATPEQVKALFRRSRIVGRRFPIVHVPMGVETVEVSTFRSGQVRQNDAGRV
VRDNAYGTMAQDAVRRDFTCNALYYDVIKGEVIDFHRGMDDIAARRLVMIGDAAERYCED
PVRILRAVRLSGKLGFEVAAETAAPIAAAVHLLAREPQSRLFDELLKILFCGYAEACLRQ
LAVLGVGDEVHPFLSVLQQGLEQDTVVAQALRGTDARVREGKTVSAGFVLAALLWARVRP
LWQHNIGRGQSPAAAMGDAVLQIRGGFERDWGVPQRYSAVMREIWLMQPQFAHQRGGRPF
RLLAQPRFRAAYDFLLIRAAAGEADAQTAEWWTRFQAANEAQRKQMTAAQSNTSSGDAPA
KKKRRRRRRKSAASANKASES
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaatgggttaagaaaaaattggcaagaaatgccgctgctggggaagtgcgc
cgttcggtggatttaattgtggaaggaacggcggcggtcagcattatccgcaagctggtt
caggcgggttatgaggcgtatctggtgggtggtgcggtgcgcgatttgctgctgggggtg
cagccgaaagattttgatgtggtgaccaatgccacgcccgaacaggttaaggcattgttt
cggcgcagtcgtattgtgggcaggcgttttccgattgtgcatgtgccgatgggggtggaa
acggtggaagtcagcactttccgcagcgggcaggtgcgccaaaacgatgcgggcagggtg
gtgcgcgacaatgcttatggcacaatggcgcaagatgcggtacggcgcgattttacctgt
aatgctttgtattacgatgtgattaaaggggaggtgattgattttcatcggggcatggac
gatattgcggcgcggcggctggtgatgattggcgatgcggcagagcgttattgtgaagat
cctgtgcggattttgcgggcagtgcgtttgtcgggcaagctgggttttgaagtggcggcg
gaaacggctgcacccattgccgctgcggtgcatttattggcgcgtgagccgcagtcgcgt
ttgtttgacgaattattgaaaattttattctgcggttatgcggaagcctgtttgcgccaa
ttggcagtgctgggcgtgggcgatgaagtgcatccgtttttatcggttttgcagcagggt
ttggaacaggacacggtggtggcgcaggctttgcgcggcacagatgcgcgggtgcgcgaa
ggcaaaaccgtatcggcgggttttgtgttggcggctttgctatgggcgcgggtgcgtccg
ttgtggcagcacaatatcgggcgcggacaatcccccgccgcagcgatgggcgatgcggtg
ctgcagattcgcggcggttttgaacgcgattggggcgtgccgcagcgttattcggcggta
atgcgtgagatttggctgatgcagccgcagtttgctcatcagcgtggtggtcgtccgttt
cgtcttttggcacaaccgcgttttcgtgctgcttatgattttctgctgattcgggcggcg
gcgggcgaagccgatgcacaaacggcagaatggtggacacggtttcaagcagccaatgaa
gcgcaacgcaagcagatgaccgcagcccaatccaatacctcttcaggcgatgcgcccgcc
aagaaaaagcgccgccgcagacggcgcaaatcggctgcttctgcgaataaagcatcagaa
agttaa
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