Conchiformibius steedae: H3L98_04855
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Entry
H3L98_04855 CDS
T06730
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cste
Conchiformibius steedae
Pathway
cste03420
Nucleotide excision repair
cste03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3L98_04855
03430 Mismatch repair
H3L98_04855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_04855
Enzymes [BR:
cste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3L98_04855
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L98_04855
MMR (mismatch excision repair)
Other MMR factors
H3L98_04855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_22
YgfZ_barrel
HTH_7
DUF6616
Motif
Other DBs
NCBI-ProteinID:
QMT34517
LinkDB
All DBs
Position
871056..873233
Genome browser
AA seq
725 aa
AA seq
DB search
MMMAETADTLLQGLNAEQLAAVTYPPAPLLILAGAGSGKTRVLTTRIAWLLHTRQVRPRE
ILAVTFTNKAAKEMRSRIEAMVAGSLQGMWIGTFHGLCHRMLRQHWREAGLPQAFQIMDS
AEQLALIKRLLKQLDISEEALPPRLMQGFINAQKEEGLRAGAIDAPDPIAKRLIRVYAEY
EQVCEREGVLDFAELLLKSYELLNGNTDLLRRYQMRFRHILADEFQDTNVLQYRWLMLLA
GGGAALCAVGDDDQSIYRFRGARVGNMADLMRDLGIGDALRLEQNYRSTGTVLAAANALI
ARNRGRLGKNLRTTAGAGEPIRLFSAADDIAEAAFVVNEIRKLLQQGTSAAQIAVLYRSN
AQSRVLEQALFREKIAYRIYGGLRFYERAEIKHALAYLRLAVNPADDNAFLRIVNMPPRG
IGERTVAAVREQAAANGVPLLAAAQQMAGKSAKVAAFAVLMARFQALAGTADLPDLLAEI
ISSSGLYDYFAKQNNAAERERTENLDELLNAARLFRPDQTAVENEAESREAGAQAILLAF
LSNAALEAGDDEAETDNGVSLMTVHAAKGLEFDAVFITGLEEGRFPSEQSVSDAEAVEEE
RRLMYVALTRARRRLYLSLAQRRMLHGAVRTGVVSRFIGEIPPELLQNVSPAKTVIRDNV
VHNQAKTSAPIHGFYAGQRVHHGKFGAGVVVSVRDAGASARVKVDFDSWGSKELDTAFAN
LMIRD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
ctgatgatggcagaaacggcggatacgctgttgcaggggctgaacgccgaacaattggca
gcggtaacgtatccgcctgcgcccttgctgattttggctggcgcgggcagcggcaaaacc
cgtgtgctaaccacccgtattgcttggctgttgcacacgcggcaggtgcgtccgcgcgaa
attttggcggtcacttttaccaataaagccgccaaagaaatgcgttcccgcatagaagcg
atggtagcaggctcgttgcaaggcatgtggataggcacgtttcatggtttgtgccaccgt
atgctacgtcagcattggcgcgaagcaggtttgccgcaggcgtttcaaattatggattcg
gcagagcagcttgccttgattaaacgtctgctcaagcagttggacattagtgaagaagcc
ctgccgccgcgcctgatgcagggttttatcaatgcccaaaaagaagaaggcttacgcgca
ggcgcgattgatgcgcctgaccccattgccaaacgcctgattcgcgtgtatgccgaatac
gaacaagtttgcgaacgcgaaggcgtgttggattttgccgaattgctgctcaagagctat
gaattgctcaacggtaatacggatttgctgcgccgttaccaaatgcgtttccgccatatt
ttggcagacgaatttcaagacaccaatgttttgcaataccgttggctgatgttgttggca
ggcgggggcgcggcattgtgtgcggtgggcgatgacgaccagagcatttaccgttttcgc
ggggcgcgtgtgggcaatatggcggatttgatgcgcgatttgggcataggcgatgcgctg
cgtttggaacagaattaccgttccacaggcacggtattggcggcggcgaatgccttgatt
gcgcgtaaccgcgggcgtttggggaaaaacctgcgtaccacggcgggcgcgggcgagccg
atacgtttgttttcggcagcagacgatatagcagaagcggcgtttgtggtaaacgaaatc
cgcaagctgctgcaacaaggcacgtctgcggcgcaaatcgcggtgttataccgcagcaac
gcgcaatcgcgggtgttggaacaagccttattccgtgaaaaaattgcttatcggatttac
ggcggtttgcgtttttacgaacgcgccgaaatcaaacacgcgctggcgtatttgcgtttg
gcggtgaatcctgctgatgacaatgcctttttgcggattgtgaacatgcccccgcgcggt
attggcgaacgcacggtggcggctgtgcgcgaacaggcggcggcaaacggggtgccttta
ttggcggcggcgcagcagatggcgggaaaatcggcgaaagtggcggcgtttgccgtgttg
atggcgcgttttcaggctttggcaggcacagcggatttacctgatttattggcggaaatc
ataagcagcagcggtttgtatgattattttgccaagcaaaacaacgccgccgagcgtgag
cgcactgaaaatttggacgagttattaaacgctgcgcgtttgttccgccccgaccaaaca
gcggtggaaaacgaagccgaaagccgtgaagcgggcgcacaggctattttgttggcgttt
ttaagcaatgctgctttagaagcgggcgacgatgaagccgaaaccgacaacggcgtgtcg
ctgatgacggtacacgccgccaaaggcttggaatttgatgctgtttttattaccggtttg
gaagaagggcgttttccgtccgagcagagcgtgagcgatgccgaagcggtggaagaagaa
cggcggctgatgtatgtggcattaacacgggcgcggcgcaggctgtatttgagcttggcg
caacggcgtatgttgcacggcgcagtgcggacgggcgtggtgtcgcgctttatcggcgaa
attccgcccgaattattgcaaaacgtgtcgcccgccaaaacagtgattcgcgataatgtg
gttcataatcaggcaaaaacatctgcgccgatacacggtttttatgcgggacagcgcgtg
catcacggcaaattcggtgcgggcgtggtggtgtcggtgcgcgatgcgggcgcgagtgcg
cgggtaaaagtagattttgacagctggggcagcaaagagttggatactgcctttgccaat
ttaatgattagggattaa
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