Conchiformibius steedae: H3L98_06465
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Entry
H3L98_06465 CDS
T06730
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cste
Conchiformibius steedae
Pathway
cste03030
DNA replication
cste03430
Mismatch repair
cste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L98_06465
03430 Mismatch repair
H3L98_06465
03440 Homologous recombination
H3L98_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cste03032
]
H3L98_06465
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_06465
Enzymes [BR:
cste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L98_06465
DNA replication proteins [BR:
cste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3L98_06465
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3L98_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF5997
DNA_pol_A_exo1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QMT32767
LinkDB
All DBs
Position
complement(1201846..1203210)
Genome browser
AA seq
454 aa
AA seq
DB search
MEKRFAELARQLLRLGRAVAVLDLEATGGDFLRDRMIEIAYLKFENGTIKQVQQLINPQQ
ALTPFIEKLTGIDDALLADAPVFGDTAADLAADLRGCILVAHNSKFDYTLLKQEFERENI
AFATPALCTVKLSEHLFPQEKKHSLDNVAERFGIDVPASRHRAMTDVLVLAEFLQQLTQH
QPNWCETAQTLLHPPAPPPDLPEDLTHQVFALPDGFGTVIWHDDKGAGTVHACQQAYADT
VRALARTNNAYPAAISGKAAVGILHALAQKGRFLQEHPAYTAATAAERFTVRFVSDHQGL
LRARTVRWRNGLYRHAPHGVFVHGKAATRALLLWAQQYRICPQRLGLNDGAPERPAPSPE
EIGQHNLAVQKALVHFAAAPLLEISETDEHTGQKYIFICQNSAIQLADELWYADTAVADA
VHEMQKHAPHRVRERRYVSAWQQALASVPKKSKS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgttttgcggaattggcgcggcagctgttgcggttggggcgggcagtggcg
gtactggatttggaagccacaggcggcgattttttacgcgaccgcatgattgaaattgcc
tatctgaaatttgaaaacggcacaatcaagcaggtacaacagttaattaacccacaacaa
gcactcacgccgtttatcgaaaagctgacgggcattgatgatgcgctgctggcagatgcg
cctgtgtttggcgacacagcggcggatttggcagcagatttgcgcggctgcatattggtg
gcgcacaacagcaaatttgattacacgctgttgaaacaagaatttgagcgggaaaacata
gcgtttgccacgcctgcactgtgtacggtcaagctgtcggaacacttgtttccacaggaa
aaaaaacacagtttggataatgtggcggaacgctttggcattgatgtgcctgcttcgcgc
catcgggcgatgacagatgtgttggtgttggcagaatttttgcaacaattaacgcaacac
cagcccaattggtgcgaaacagcgcaaacactgctgcacccgcccgcaccgccgcctgat
ttgcctgaagatttgacccatcaggtttttgccttacccgatggttttggcacggtaatt
tggcacgacgacaagggcgcaggaacggtacacgcctgccaacaggcatacgccgatacg
gtacgcgcattggcacggacgaacaatgcctatcccgcagccatttcgggcaaggcagca
gtaggtatattgcacgctttggcgcaaaaagggcgatttttgcaagaacatcctgcttat
acggcagcaacggcggcggaacgttttaccgtgcgttttgtgagtgaccatcaagggctg
ttacgcgcccgcaccgtgcgttggcgcaatggtctgtaccgacacgcgccgcatggtgtg
tttgtacacggcaaagcggcaacaagggctttgttgctgtgggcgcagcaataccgtatt
tgtccgcagcgtttaggtttaaatgatggcgcacctgaacgccctgcaccctcgcctgaa
gaaataggacaacataatctcgctgtccaaaaggctttagtacattttgccgctgcgccg
ttgttggaaatcagtgaaaccgatgaacacacaggacaaaaatacatttttatctgccaa
aacagtgcaatacaattagcagatgagttgtggtatgctgatacggcggtggcagatgcg
gtgcacgagatgcagaaacacgctcctcaccgtgtgcgcgaacggcgttatgtttcggcg
tggcaacaggctttggcaagtgtgcctaaaaaatcaaaatcttaa
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