Conchiformibius steedae: H3L98_06650
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Entry
H3L98_06650 CDS
T06730
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cste
Conchiformibius steedae
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cste03016
]
H3L98_06650 (truB)
Enzymes [BR:
cste01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H3L98_06650 (truB)
Transfer RNA biogenesis [BR:
cste03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H3L98_06650 (truB)
Prokaryotic type
H3L98_06650 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QMT32800
LinkDB
All DBs
Position
complement(1237707..1238621)
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AA seq
304 aa
AA seq
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MTTTTTRPVHGVLLLDKPLGISSNTALQRARRLYRAEKAGHTGVLDPLASGLLPVCFGEA
AKFAQYLLDADKAYTATLKLGEATTTGDAEGDIIATARSDIALNEFKQSCTALTGTIRQV
PPMFSALKHEGKPLYEYARQGITIERKARDITIYQINISDFSPPFATLDVRCSKGTYIRT
LAEDIAKHIGTFAHLSALRRTATAGFSVANAHTLDHLAELGENARDALLLPCDALVTHLP
RIDVSADTARDVHCGRLPAWKGAAPAHTPLRAYAPCGGFVGLVSYSPAHGTLKAVRLMST
PKSD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccaccacacgccccgttcacggcgtattattattagacaaacccctaggc
atcagcagcaacaccgccctacaacgcgcccgccgcctgtaccgcgccgaaaaagcaggg
cacacaggcgtattagaccccttggcaagcggattactgcccgtctgctttggcgaagcc
gccaaattcgcccaatatttattggatgccgacaaagcctacaccgccaccctcaaactt
ggcgaagccaccaccacaggcgatgccgaaggcgacatcatcgccactgcccgcagcgat
atagctttaaacgaatttaaacaatcctgtaccgcactcacaggcacaatccgccaagtt
ccccccatgttttccgccctcaaacacgaaggcaaacccctgtacgaatacgcccgtcaa
ggcattaccatcgagcgcaaagcacgcgacatcaccatctaccaaatcaacatcagcgat
ttttccccgccgtttgccacgctggacgtgcgttgcagcaaaggcacttatattcgcact
ttggcagaagacatcgccaaacacatcggcacattcgcccatttaagcgccctgcgccgt
accgccaccgctggtttttcggttgccaacgcccacactttagaccaccttgccgagctg
ggcgagaatgcccgtgatgcgctgttattgccctgcgatgccttggtaacgcacctgccg
cgcattgatgtttctgccgacaccgcccgcgatgtccattgtgggcgtttacccgcttgg
aagggcgcagcacccgcacacacgcccttacgcgcctacgcgccctgcggcggatttgtc
ggattggtatcctactcgcccgcacatggcacgctgaaagccgtgcgtttaatgagtaca
cccaagtcagattag
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