Conchiformibius steedae: H3L98_07040
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Entry
H3L98_07040 CDS
T06730
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cste
Conchiformibius steedae
Pathway
cste03030
DNA replication
cste03430
Mismatch repair
cste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L98_07040 (holB)
03430 Mismatch repair
H3L98_07040 (holB)
03440 Homologous recombination
H3L98_07040 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cste03032
]
H3L98_07040 (holB)
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_07040 (holB)
Enzymes [BR:
cste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L98_07040 (holB)
DNA replication proteins [BR:
cste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3L98_07040 (holB)
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3L98_07040 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QMT32872
UniProt:
A0A7D7S6I1
LinkDB
All DBs
Position
complement(1320184..1321179)
Genome browser
AA seq
331 aa
AA seq
DB search
MIYPWHDRTWRELLAQAPPPALLLYGAADTGKTAFARAYARFLLCESPLNQGACGECASC
RLFEHHAHPDFYLLAPDGDDGSSTGRKLPQIKIDAVRELLEPLNQSSVRGGRRVVLIAPA
DSLNVQAANALLKILEEPPQAVMFLLVSHRRERLLPTVRSRCRPLLLPAPNHTQALQFLQ
QQHISDAENLLAFHGGAPLFAHEPEQDSLRATLLDLLAQPRLLAILDFAADFDKHKYPLA
LLLDWLHKWLADLALALHALPPRYYPAHAQAVAALAARTHPATLFRFQDHLNRLAPYGHH
SLNVRMQAEALLSSYLLMLQNKPFHFQGNPP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccttggcacgaccgcacatggcgcgaattgctcgcgcaagcgccaccgcct
gcattgctgttgtatggcgcggcagacacaggcaaaaccgcctttgcccgcgcttacgcc
cgctttttgttgtgcgaaagccccttaaatcaaggggcttgcggcgaatgtgcgtcctgt
cgcctgtttgaacaccacgcccaccccgatttttacctgctcgcccccgatggcgacgac
ggcagcagcacagggcgcaaactgccacaaatcaaaattgatgccgtgcgcgaactgctg
gaacccttaaaccaatcgtctgtgcgcggcggacggcgcgtggtgctgattgcccccgcc
gacagcctgaacgtacaagccgccaacgcgctgttaaaaattctggaagagcccccgcaa
gcggtgatgtttctgctggtttcgcaccgccgcgaacggctgctgcctaccgtccgcagc
cgttgccgtccgctgctgctgcccgcacccaaccacacccaagccctgcaatttttacag
cagcaacacatcagcgatgccgaaaacctgcttgcctttcacggtggtgcgccgctgttc
gcccacgaacccgaacaagacagcttacgcgccaccctgttagacctgctcgcccaaccg
cgcctgcttgccatattggattttgctgccgattttgacaaacacaaatacccccttgcc
ctgttgcttgattggctgcacaaatggcttgccgacctcgccctcgccctgcacgcccta
ccgccgcggtattatcccgcccacgcccaagccgtcgccgcccttgccgcccgcacccat
cccgccacacttttccgttttcaagaccacttaaaccgtcttgccccttacggacaccac
agcctcaatgttagaatgcaggcagaagccctgttaagcagctacttactgatgctgcaa
aacaaaccctttcactttcaaggaaatcccccatga
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