Conchiformibius steedae: H3L98_07070
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Entry
H3L98_07070 CDS
T06730
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cste
Conchiformibius steedae
Pathway
cste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3L98_07070 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_07070 (recB)
Enzymes [BR:
cste01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H3L98_07070 (recB)
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L98_07070 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF374
TMP_3
ResIII
Motif
Other DBs
NCBI-ProteinID:
QMT32878
UniProt:
A0A7D7N0W4
LinkDB
All DBs
Position
complement(1327396..1330944)
Genome browser
AA seq
1182 aa
AA seq
DB search
MTAPFAPLDVPLNGTNLIEASAGTGKTWNIAALFARLVVLEQADVSQILVVTFTKAATAE
LKTRLRARLDEALNVLRRCADADNPDDALIHECGGDDFLYRLLQRGLQQEGLARLMLRLQ
AAVSGFDNASVYTIHGFCQRVLQDYAFFCQVPFDIELDEQGDRAENLNAAQDFWRGRIAD
DDVWAQLSYRHRYTPQQALDELESYIARPYLHTPVSAQAQDFAAAQARLAECWQNTVAQL
PEIEAAFWRIHPSLNSNVFRINSFTDKFAMLHQLSTQHAPDAATLRQLLQHKDGHLLFDE
GFVREKVKKNALAPEPSDLDQIQILAELGNAAAEAATAETAAWADMQRQLLTYLHESRRV
HKQSHPRRVFDDLLLDVAAALAPDAPHVHTLARALSAQWRFALIDEFQDTDPLQYAIFRT
AFAATDTPLFLVGDPKQAIYGFRGADIFAYLQAAGDAAERHYTLDTNRRNHHALNQGIDA
LFARAQPFVLPQIAYPPVRASREVSRLHGADGNPALAIRWLNEGSETAAVLEARAADWSA
AETAALLGGSHTLDTDNGTRPLLANDIAILVRRRKDGELVRRALKKHGIQSVLLSQNNIF
AEAEAEACAALLDFFIQPQQSDTLNFVLAGCLFQYSAADLQALNDNEHQRSAWTDSAQRS
LAHWQQAGIYAALQHFCREHGVETRLLAQRNERSLTNLHQVMELLAAEDELSHSPVSLQQ
WLHRQIESAKQGSGTQAHTLRLESDNDLVKIVTIHASKGLQYPVVICPFIWKAAAAPRSE
WHIVHRGSEAVLLHDSQFDEADREQQQREHLSEDLRLLYVALTRAEERLYLYAGAYRDGK
GSAPAYLLDMPDKTTTNDNACREHWQQFAQTHGLTWYGHQAPSAVRADWSALARPVYRAA
EYAPRRFGFIRHTSFTGLLRQSERLAAARAELPPSDSPADLPDPAPLTPAANAEGIHAFP
HGSNAGICLHSLLENRLFAPADPAADALILERYGFDPEQWCDTVGELLQRTRRTPLLPDH
TTLADFSPQQRLTETEFVLHTDFRLADIRRLLAHSGLSPHIIQAAAALQFQDLHGYLNGA
IDLMCRTADGRVLIIDYKSNRLGDHAAAYTPAALDEAVADHHYYLQALIYSIAAARYLHS
RHALPEQIGVRYLFLRGLDGHSSHSVWSWDIHTADLSPWLIV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccgtttgcgcctttagacgtaccgcttaacggcaccaacttaattgaagcc
tcggcaggcacgggcaaaacatggaacatcgctgcgctgtttgcgcggctggtggtgctg
gaacaggcagatgtgtcgcaaattttggtggtgacctttaccaaagccgccactgcggaa
ctgaaaacccgtttgcgggcgcgtttggatgaagccttaaacgtgttgcgccgctgtgcc
gatgccgataatcctgacgatgccttgatacacgaatgcggcggcgacgattttttatac
cgtttattgcaacgcggtttgcaacaagaagggctggcgcggctaatgctgcgtttgcaa
gcggcggtaagcggttttgacaatgcttcggtttacaccattcacggtttttgccaacgg
gtgttacaggattatgcgtttttttgccaagtgccgtttgatattgaattagacgaacaa
ggcgaccgcgctgaaaacttaaacgcggcgcaggatttttggcgcgggcgcattgccgat
gacgatgtgtgggcgcagttaagctaccgccaccgttacacgccgcagcaggctttagac
gagttggaaagctatatcgcccgtccttatctgcacacgcccgtatcggcgcaggcgcag
gactttgcagcggcgcaggcacggttggcggaatgttggcaaaacacggtggcgcagttg
cctgaaattgaagcggcattttggcggatacatccgtccctcaacagcaatgtgttccgc
atcaactcgtttaccgataaatttgctatgttgcaccaattatcgacacagcacgccccc
gatgcggcaactttacgccaactgttgcagcacaaagatggtcatttgctgtttgacgag
ggatttgttagagaaaaagtcaaaaaaaatgcccttgcccctgaaccatctgaccttgac
caaatacagattttggcagaactgggcaacgccgctgccgaagctgccacagcggaaacc
gctgcatgggcggatatgcagcggcagttgctgacctatttgcacgaaagccgccgcgta
cacaaacaaagccacccgcgccgcgtgtttgacgaccttttattagacgttgccgccgca
ctcgcgcccgatgcgccacacgtgcacacgctggcacgcgcactgtcggcgcaatggcgt
tttgcgctgatagacgaatttcaagacacagacccgctgcaatacgccattttccgcacc
gcgtttgctgccacagatacgcccttgtttttggtgggcgaccccaaacaggcaatttac
ggttttcgcggcgcggatatttttgcctatctgcaagcagcaggcgatgccgccgaacgc
cattacactttagacaccaaccgccgcaaccatcacgctttaaatcaaggcattgacgca
ctgtttgcgcgggcgcagccgtttgtgctgccgcaaattgcctatccgcccgtacgcgcc
agccgcgaagtttcgcgtttgcacggtgcagacggcaatcccgcccttgccatacgctgg
ctgaatgaaggctcggaaaccgccgccgtgctggaagcccgcgccgccgattggtctgcc
gccgaaaccgccgcgctgctaggtggcagtcacaccctagacaccgacaacggcacacgt
ccgctgttggcaaacgacattgccatattggtgcgccgccgcaaagatggcgaactggtg
cgccgtgccttaaaaaaacacggtattcaaagcgttttactcagtcaaaacaatattttt
gccgaagccgaagccgaagcctgcgccgcgctgctggatttttttatccaaccgcaacaa
agtgatacgcttaattttgtgctggcaggctgtttgttccaatacagcgccgccgatttg
caggcactcaacgacaacgaacaccagcgttcggcgtggacggattcggcacagcgcagt
ttggcgcattggcaacaagcgggtatttacgccgctttacagcatttttgccgcgaacac
ggcgtggaaacccgtttgctggcgcagcgcaacgaacgcagtctgaccaatctgcatcag
gtgatggaacttctcgccgccgaagacgaactcagccacagccccgtgtcgctgcaacaa
tggctgcaccgtcaaattgaatctgccaaacagggcagcggcacacaagcccacacgctg
cgtttggaaagcgacaatgatttggtcaaaatcgtgaccattcatgcgtctaaaggcttg
caatatcctgtggtgatttgtccgtttatttggaaagccgccgccgcaccgcgcagcgaa
tggcatattgtccaccgtggcagcgaagcggtgttgttgcacgacagccagtttgacgaa
gccgaccgcgaacagcagcagcgcgaacacctgtcggaagacctgcgtttgctgtatgtg
gcacttacccgtgccgaagaacggttgtatttgtatgcgggggcttatcgggacggcaag
ggcagcgcacccgcctatctgctggatatgcccgacaaaaccaccaccaacgacaacgct
tgccgcgaacattggcagcagttcgcgcaaacgcatggtttgacatggtacggacatcaa
gccccttccgccgtccgcgccgattggtctgcccttgctcgccccgtttaccgcgccgcc
gaatacgcgccgcgccgtttcggttttatccgccacaccagctttacaggtttgctgcgc
caaagtgaacgccttgccgctgcccgcgccgaactgccgccgtccgacagccccgccgac
ctacccgaccccgctccccttacgcccgccgccaatgccgaaggcatacacgcctttccc
cacggcagcaatgcggggatttgcctacactccctgttggaaaacaggctgtttgcccct
gccgaccccgccgccgatgcgctgatactggaacgttacggttttgaccccgaacaatgg
tgcgacaccgttggcgaactgttgcagcgcacccgccgcaccccgctgctgcctgaccac
accactttggcagatttttcgccgcagcaacgtctaaccgaaaccgaattcgttttacat
accgatttccgccttgccgacatccgccgtttgctggctcacagcggtttatcgccccat
attattcaagctgctgctgctttgcagtttcaagacctgcacggttatttaaacggcgca
attgacctgatgtgccgcaccgcagacgggcgcgtgctgattattgactacaaatccaac
cgtttgggcgaccacgccgccgcctacacacccgccgcgctcgatgaagccgttgccgac
catcattactatctgcaagccctgatttacagcatcgccgccgcccgttatctgcacagc
cgccacgccctgcccgagcaaatcggcgtgcgctacctgtttttgcgcgggctggacgga
cacagcagccacagcgtgtggtcgtgggacatccacactgccgatttgtcgccgtggctg
atcgtataa
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