Conchiformibius steedae: H3L98_08875
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Entry
H3L98_08875 CDS
T06730
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cste
Conchiformibius steedae
Pathway
cste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3L98_08875 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_08875 (uvrB)
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L98_08875 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3L98_08875 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
Y3IP1_CEST_N
Motif
Other DBs
NCBI-ProteinID:
QMT33195
LinkDB
All DBs
Position
complement(1720001..1722016)
Genome browser
AA seq
671 aa
AA seq
DB search
MQILHFPDSPFVLHQPFPPAGDQPTAIAALLEGLADGLSAQTLLGVTGSGKTYTMANVIA
QSGRPAIIMAHNKTLAAQLYAEMRGFFPDNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA
INEHIEQMRLSATKNLMTRNDVVIIATVSAIYGIGDPREYQQMILSVKEGDILAREDIVK
ILVSMQYERGEMDFKRGSFRVRGDSIDIYPAENADIALRISLFDDEIERLDLFDPLSGSP
IRRIGRYTVFPSSHYVTPRDTVLRACEAIKAELRERIDFFTQENRPVEQQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSGKAEGEPPPTLLDYLPRNALMFIDESHVTVPQIGAMYKGD
AARKQNLVDYGFRLPSARDNRPLKFHEFERIMPQTVFVSATPAQYEAEHASQVVEQVVRP
TGLLDPQIIVRPVATQVDDLLAEIRARSDKGERVLVTTLTKCMAEQLTEYYGELGVKVRY
LHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL
IQTIGRAARNVNGVAILYADKITDSMQSAIDETERRRDKQKAFNQAHGITPQQINKQIKD
LIDGVYHDDAPAKNCADPLSGKVISEDDALKEMARLEKAMQQAARDLQFEEAAVLRDQIH
ALRDRILLEKG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcttcactttcccgattccccgtttgtgctgcaccagccctttccgcctgcg
ggcgaccagcctactgccattgccgccttattggaaggtttggcagacggcttatcggcg
caaaccctgctcggcgtaaccggttcgggcaaaacctacaccatggcaaacgtgattgcc
caaagcggacgacccgccattattatggcgcacaacaaaacccttgccgcccagctttac
gccgaaatgcgcggatttttccccgacaacgccgtcgaatactttgtttcctattacgat
tattaccagcccgaagcctacgttcccagtcgcgacctgtttattgaaaaagattccgcc
atcaacgaacacattgaacagatgcgcctttccgccaccaaaaacctgatgacgcgcaac
gacgtagtcattatcgccaccgtgtccgccatttacggcatcggcgacccgcgcgaatac
cagcaaatgattttgtcggtaaaagaaggcgatatcttggcgcgggaagacattgttaaa
attctcgtgtccatgcagtacgagcgcggcgagatggattttaaacgcggcagtttccgc
gtgcgcggcgacagcatcgatatttaccccgccgaaaacgccgatattgccttacgcatc
agcctgtttgatgacgaaattgaacgtttggatttatttgacccgctttcaggcagcccg
attcggcgtatcgggcgttataccgtgtttccgtccagccactacgttaccccgcgcgat
accgtattacgcgcctgcgaagccattaaagccgaattgcgtgaacgcattgattttttt
acccaagaaaatcgccccgtagagcagcagcgcattgaacagcgcacccgttttgatttg
gaaatgctgtatgaaatgggtttttgcaaaggcattgaaaactactcacgccacttttcg
ggcaaggcggaaggcgaaccgccgcccacgctgctggattatctgccgcgtaacgccttg
atgtttattgatgaaagccatgttaccgtgccgcaaatcggcgcgatgtacaaaggcgat
gccgcgcgtaaacaaaatttggtggattacggtttcaggctgccgtctgcgcgtgataac
cgtccgctaaaattccatgaatttgaacggattatgccgcaaaccgtgtttgtttccgcc
acgcccgcgcaatacgaagccgaacacgccagtcaggtggtggaacaagtcgtgcgcccc
acaggtttgctcgacccgcaaattattgtccgtcccgttgccacacaggttgatgattta
ctggcggaaatccgcgcccgcagcgacaagggcgagcgcgtgttggtaaccactttaacc
aaatgcatggcggaacagcttaccgaatattacggcgagttgggcgtgaaagtgcgctat
ttgcacagcgatattgatacggtggaacgggttgaaattattcgcgatttgcgtttgggt
gtatttgatgtgctggtggggattaacctgctgcgcgaaggcttggacattcccgaagtg
tcactggtggcgattttggatgcggataaggaaggctttttgcgctcgcaccgcagcctg
attcaaaccatcggacgtgcggcgcggaatgtgaacggcgtggcgattttgtatgccgat
aaaatcaccgattccatgcaatccgccatagacgaaaccgaacgccgccgcgacaaacaa
aaggcgtttaatcaggcacacggcatcacaccgcagcaaatcaacaagcaaattaaagat
ttgattgacggcgtgtatcacgatgatgcccccgctaaaaactgtgcagacccgttgtct
ggcaaggtaatcagcgaagacgatgccttaaaagaaatggcgcgtttggaaaaagccatg
cagcaagcggcgcgggatttgcagtttgaagaagcggcggtattgcgcgaccaaattcat
gctttgcgggacaggattttattggaaaaaggataa
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