Conchiformibius steedae: H3L98_09230
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Entry
H3L98_09230 CDS
T06730
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cste
Conchiformibius steedae
Pathway
cste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3L98_09230 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cste03019
]
H3L98_09230 (groL)
03110 Chaperones and folding catalysts [BR:
cste03110
]
H3L98_09230 (groL)
03029 Mitochondrial biogenesis [BR:
cste03029
]
H3L98_09230 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cste04147
]
H3L98_09230 (groL)
Enzymes [BR:
cste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H3L98_09230 (groL)
Messenger RNA biogenesis [BR:
cste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H3L98_09230 (groL)
Chaperones and folding catalysts [BR:
cste03110
]
Heat shock proteins
HSP60 / Chaperonin
H3L98_09230 (groL)
Mitochondrial biogenesis [BR:
cste03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H3L98_09230 (groL)
Exosome [BR:
cste04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H3L98_09230 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H3L98_09230 (groL)
Exosomal proteins of breast cancer cells
H3L98_09230 (groL)
Exosomal proteins of colorectal cancer cells
H3L98_09230 (groL)
Exosomal proteins of bladder cancer cells
H3L98_09230 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QMT33260
LinkDB
All DBs
Position
complement(1802871..1804520)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVQFGADVRQKMVNGVNVLANAVRVTLGPKGRNVVLDRSFGGPHITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGI
DKAVAALVDELANIAKPCETYEQIAQVGSISANSDESVGKIIADAMQEVGKEGVITVEDG
KSLENELEVVKGMQFDRGYLSPYFVNDVEKQIAGLDSPFVLLFDKKISNIRDLLPVLEQV
AKTSRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEVGLSLEQATLEHLGQAKRIEIGKENTTIIDGAGDKAAVEARVGEIRKQIETATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALL
RARAALSKVHADNADQEAGVKIVLRAVESPLRQIVANAGGEASVVVNKVLEGEGNFGYNA
GNDSYGDMIAMGVLDPAKVTRSALQHAASIAGLMLTTECMIAELPEDKAAAPDMSGMGGM
GGMGGMGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtacaattcggcgcagacgtgcgccaaaaaatggttaacggcgta
aacgtattggcaaacgccgtgcgcgtaactttaggtcctaaaggacgcaacgtggtattg
gatcgttcattcggcggtccgcacatcaccaaagacggcgtatccgttgccaaagaaatt
gagctgaaagacaaatttgaaaacatgggcgcacaaatggttaaggaagtggcttccaaa
accaatgatgtagcgggcgacggtacgactaccgccaccgttttggcgcaatccattgtt
gccgaaggcatgaaatatgtgaccgcaggcatgaatcccactgatttgaaacgcggtatt
gacaaagccgttgccgctttggtggacgaattggcaaacatcgccaagccctgcgaaact
tacgaacaaatcgcccaagtgggttctatttctgccaactctgatgaatctgtgggcaaa
atcattgccgatgccatgcaagaagtgggcaaagaaggcgtgattaccgttgaagacggt
aagtctttggaaaacgagctggaagtggtaaaaggtatgcagtttgaccgcggttacctg
tcgccctacttcgtgaatgatgtggaaaaacaaatcgctggtttggacagcccgtttgtg
ttgctgtttgataaaaaaatcagcaatatccgtgatttgttgcccgttttggaacaagtt
gccaaaaccagccgccccttgttgattattgctgaagacgtggaaggcgaagccttggcg
actttggtggtgaacaacatccgcggtattctgaaaaccgttgccgtaaaagcccccggt
ttcggcgaccgccgcaaagccatgttgcaagacatcgccattttgaccggcggtaccgtg
attgcggaagaagtgggtctgtctttggaacaagccactttggaacatttgggtcaagcc
aaacgcattgaaatcggtaaagaaaacaccaccattattgacggtgcaggcgataaagcc
gctgttgaagcgcgtgtgggcgaaatccgcaaacaaattgaaaccgccaccagcgactac
gacaaagagaagctgcaagaacgtgttgccaaattggcaggcggcgtggctgtgattaaa
gtgggcgcagccaccgaagtggaaatgaaagagaaaaaagaccgcgtagatgatgccttg
cacgctacccgtgctgcggtagaagaaggcgtggttgcgggtggtggcgtggcgctgctg
cgtgcgcgtgctgctttgagcaaagtacacgccgacaacgccgaccaagaagcaggcgta
aaaattgtgctgcgtgcggttgagtctcccctgcgtcaaatcgttgccaatgcaggcggc
gaagcttctgttgtggtaaacaaagtgttggaaggcgaaggcaacttcggttacaacgcg
ggcaacgacagctatggcgacatgattgccatgggtgtgctggaccccgccaaagttacc
cgctctgcgctgcaacacgctgcgtctattgctggtttgatgctgactaccgagtgcatg
attgccgaactgcctgaagacaaagctgctgcgcctgatatgtctggtatgggtggcatg
ggcggtatgggtggcatgggcatgatgtaa
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