Conchiformibius steedae: H3L98_10700
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Entry
H3L98_10700 CDS
T06730
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cste
Conchiformibius steedae
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cste03032
]
H3L98_10700 (gyrB)
03400 DNA repair and recombination proteins [BR:
cste03400
]
H3L98_10700 (gyrB)
Enzymes [BR:
cste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H3L98_10700 (gyrB)
DNA replication proteins [BR:
cste03032
]
Prokaryotic type
DNA Topoisomerases
H3L98_10700 (gyrB)
DNA repair and recombination proteins [BR:
cste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H3L98_10700 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QMT33520
LinkDB
All DBs
Position
2080217..2082643
Genome browser
AA seq
808 aa
AA seq
DB search
MTSDQTPVSYDADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGH
CDTISVSINADNSITVQDNGRGIPTGIHPKEGRSAAEVIMTVLHAGGKFDSNSYKISGGL
HGVGVSVVNALSDWLQLTIWREGKEHFVEFQRGEALAPLKTVGDAADNQHGTRVRFLASE
DTFGNVEYHFDILAKRIRELSFLNNGVNIELTDKRDGKHENFALGGGVAGFVQYMNRKKN
PLHDKVFHAIGEKDGMTVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTIN
QYINDNDLNKKGKNGNKLDIGGEDMREGLTCILSVKLPDPKFSSQTKDKLVSAEIAPVVS
EVLAQGLKDFFEENPKIAKTITDKIVLAATAREAARKARENIQRKNVFEGLNLPGKLADC
QEKDPALSELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFDKVLDNQEISAL
FAALGISFGKSEADAPAINLEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELIERG
YVYIAQPPLYKAKHGKTERYLKDEQEKDEFLLGLAVDGAQIISGSRKLAGAELLKLAKQF
LQARHTITQESRVIDGLVLHTLLACPTISLNSAADADKAVELLSEKLREQAVALERVEGK
DGSQLIKITRQLHGNVGISYLDGKFLDSKAYQTISRTAELLKDWLEAPLTVHKPSETFAA
QGFETALDNLLADAQKGMSIQRYKGLGEMNPEQLWETTMNPNVRRLLKVRIEDAIAADEV
FVTLMGDEVEPRRAFIESNALVAQNIDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgaccaaacccccgtttcctacgatgccgacagtattcaagtgctggaaggc
ttggaagccgtgcgtaaacgccccggcatgtatatcggcgacacccaagacggctccggc
ctacaccacatggtgtttgaagtgctggacaatgccattgacgaagccctggcggggcat
tgcgacaccatcagcgtcagcatcaatgccgacaattccattaccgtgcaggacaacggg
cgcggcattcccacaggcattcaccccaaagaagggcgttccgccgccgaagtgattatg
accgtattgcacgcgggcggtaagtttgacagcaacagctacaaaatttctggcggtttg
cacggtgtgggcgtgtcggtggtcaatgccctgtccgactggctgcaactgaccatttgg
cgcgaaggcaaagaacattttgttgaatttcaacgcggcgaagcccttgccccgctgaaa
accgttggcgatgctgccgacaaccaacacggtacgcgcgtgcgttttcttgccagcgaa
gacacctttggcaatgtggaataccattttgatatccttgccaaacgcatccgcgaatta
tcgtttctaaacaacggtgtcaatattgaattgaccgacaagcgcgatggcaaacacgaa
aactttgccttgggcggcggcgtggcgggttttgtccaatacatgaaccgcaagaaaaat
cccctgcacgacaaagtgttccacgccatcggcgaaaaagacggcatgaccgtagaatgc
gccatgcaatggaacgacagttatcaagaatccgtacaatgctttaccaataatatcccg
caacgcgatggcggcacgcatttaaccgccttgcgccaagtgatgacgcgcaccatcaac
caatacatcaacgacaacgacctgaataaaaaaggtaaaaacggcaacaagctggatatt
ggcggcgaagacatgcgcgaaggtttaacctgcattttgtcggtcaagctgcctgacccc
aaattctcgtctcaaaccaaagacaaactggtttccgccgaaatcgcccccgtggttagt
gaagtgttggcgcaaggtttaaaagacttttttgaagaaaatcccaaaatcgccaaaacc
attaccgataaaatcgttttggcggccactgcccgcgaagccgcgcgtaaagcccgtgaa
aacatccagcgcaaaaacgtgtttgaagggctgaatcttccaggtaaattggcggattgc
caagaaaaagaccctgctttatccgagctttatctggtagaaggcgactcggcaggcggc
tctgccaagcaagggcgcgaccgcaaattccaagccattttgcccttaaaaggcaaaatc
ttaaacgtagaacgcgcccgttttgataaagttctggataatcaggaaatttctgccctg
tttgccgccttgggcatcagttttggcaaaagcgaagccgatgcgcccgccatcaattta
gaaaaattacgctaccaccgcatcattattatgaccgatgccgacgtggacggcgcacac
atccgcaccctgctgctgacctttttctaccgccaaatgcctgaattgattgagcgcggt
tatgtttatatcgcccaaccgccgctgtacaaagccaagcacggcaaaaccgaacgctac
ctgaaagacgaacaggaaaaagacgaatttttgcttggtttggcagtagatggcgcacaa
attatttcaggcagccgcaagttggcaggcgcagaactgctgaaattagccaaacaattt
ttgcaggcacgccacaccattacccaagaaagccgcgtaattgacggcttggtgctacac
accctgctggcgtgtccgaccatcagcctgaacagcgccgccgatgccgataaagccgtt
gaattattatcggaaaaactgcgcgaacaagctgttgcgctggaacgcgtggaaggcaaa
gacggcagccagttaatcaaaatcacgcgtcaactgcacggcaatgtcggcatcagctat
ttggacggcaaatttttggacagtaaggcttatcaaaccatcagccgcaccgccgaactg
cttaaagattggctggaagcgcccctaaccgttcacaaacccagcgaaactttcgccgca
caaggctttgaaaccgcgctggacaatctgctcgccgatgcccaaaaaggcatgagcatt
caacgctataaaggcttgggcgagatgaatcccgaacaactttgggaaacgactatgaac
ccgaatgtgcgccgtttgctgaaagtacgcattgaagatgccattgccgccgatgaagtg
tttgttaccctgatgggcgatgaggttgaaccgcgccgcgcctttattgaaagcaatgct
ttggtcgcacagaatattgatgtttaa
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