Colius striatus (speckled mousebird): 104549215
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Entry
104549215 CDS
T08355
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104549215 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csti01001
]
104549215 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csti04054
]
104549215 (CIITA)
Enzymes [BR:
csti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104549215 (CIITA)
Protein kinases [BR:
csti01001
]
Serine/threonine kinases: Other
TAF1 family
104549215 (CIITA)
Pattern recognition receptors [BR:
csti04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104549215 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104549215
NCBI-ProteinID:
XP_010208065
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
LVQKICQDWSNGEFSQFEFVFWFDCKQISLPEKTYNLKDLLLESFVKPQEGSKEIFDYIL
QNPAKVLLVFDGFEGLHDHENLPRCSASQPEKDLYSIKELLSGLIQKKILNGCTLLLTAR
PKDKVYQYVSKVDKTIEIEGFSPQQRELFITKYFEGLPYCDNALKLIKECEYLFSHCYSP
VMCRFVCFLCETVLEMGGESLPSTLTTLFLKFIQQKIIPTQADASAMQNQESLATLARIA
WCLGEKHQSAIKSDLLPSKEIKEFALKYGFLLPFALPGHPDSGEEEFGSTFSDFVIQNFL
GALHLTLAEEIKDKNPTKYLSFPSKKKKPYKWLDLVPRFLSGLLFLQDDPCFCSLSNEDI
KQPTKKQKTLLKYIRRLQINELCPERLLELLHCIYESQSNYLLQHMALRLKTDLSFLGIV
LTPPDVHVLHSILKRSRKEISLDLRNSSIDVQGLKDLVGLKNVASFRASLGDTVRLWKSL
EQTKDYELLRASTEKFVLDPFKAKTMKDISDLSELVEMQEKMINCVEDASGCSCYEIPAI
RNLRKIEFALGPECGLQGFLKLVKILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFSTL
KSLKTLNLSQNKITDVGAEKLATALPSLSSLQTLSLYNNSICDFGAENLAKVLPEMTSLR
VLDVQYNKITGVGAQQLTDSLRKCPHIKNLLMWNPTIPYGVLEHLQQLDSRISV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
cttgttcagaagatctgccaggactggtccaatggagagttttctcagtttgaatttgta
ttttggtttgactgcaaacaaataagcttacctgaaaaaacatacaacctgaaggatctg
ctgcttgaatcttttgtaaaacctcaggaggggagcaaagagatctttgactatatattg
caaaaccctgctaaagtccttctggtttttgatgggtttgaagggttgcatgatcatgag
aatcttcctcgttgctcagccagccagcctgaaaaagacttgtatagcataaaggagctg
ctttcaggactcatccaaaaaaagatactaaatggttgtactttattacttacagcaaga
ccaaaagacaaggtgtaccagtatgtgtccaaagtggacaagacaattgaaatagaagga
ttttcccctcagcagagagaattgttcataaccaaatactttgaaggattaccttactgt
gataatgcactgaaattaatcaaagagtgtgagtacttgttcagtcattgttacagccct
gttatgtgtagatttgtttgttttctctgtgagacagtacttgaaatgggaggcgagagc
cttccttcaactcttactacactcttcttgaaattcattcagcaaaagataatacctact
caagcagatgcttcagccatgcaaaatcaagagagtcttgccaccctagcccgtatagcc
tggtgtcttggggaaaagcaccaaagtgccataaaaagtgatcttctgccttctaaagaa
ataaaagagtttgctctgaaatatggatttctcctgccatttgcattgccaggacatcca
gatagtggagaagaggaatttgggagcacattctctgattttgtcattcagaatttcttg
ggtgcccttcaccttacgttagcagaggagatcaaggataaaaacccaacaaagtacctg
tcttttccatccaagaagaaaaaaccttacaaatggttagatttagtgcctcgatttttg
tctggattgttgttcctccaggatgacccctgcttctgctccctttcaaatgaagacata
aaacaaccaaccaagaagcagaaaacactcttaaaatatattcgaaggctgcagataaat
gagctgtgtccagagaggctactcgagcttttacattgtatttatgaatcacaaagcaat
tatcttttgcagcacatggccttaaggctcaagacagatttgtcttttctgggcatagtt
cttacaccacctgatgtccatgtactgcactcgattttaaaaaggtcaagaaaagagatt
tccttggatttacgaaacagcagcattgacgtgcaagggctgaaagacttggttggctta
aagaacgtggcgtcgttcagggcctccctcggtgatactgttaggctctggaaatcttta
gaacagacaaaagactacgaactgctgagagcgtcaacagagaaatttgttcttgatccc
ttcaaggcaaagacaatgaaggacatcagtgatctctcagagcttgtagagatgcaggag
aagatgatcaactgtgtggaagatgcatctggctgcagctgctatgaaattcctgccatc
agaaacctcaggaaaatagaatttgcgctgggtccagaatgtggccttcagggattccta
aagctcgtgaaaattcttgcagcgtttccatcactgcagcatttagaccttgatgctctg
agtgaaaatggcataggagatgaaggagcaaagagcctatctgaagtcttttcaaccctg
aaatcactgaaaacattaaacttatcacagaataagataacagatgtgggggcggagaaa
ctagccacagctcttccttccttgtcttcattacagacactaagcttatacaataacagc
atttgtgactttggagcagaaaatcttgcaaaagttcttcctgagatgacatccttaaga
gtgctcgatgttcaatataacaaaataactggtgttggagcccagcagttgactgacagc
ctacgaaaatgcccccatataaagaacttgctgatgtggaatcccaccattccctatgga
gttcttgaacaccttcagcagctggactccaggatcagtgtgtag
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