Colius striatus (speckled mousebird): 104549287
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Entry
104549287 CDS
T08355
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03013
Nucleocytoplasmic transport
csti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104549287 (UPF3A)
03015 mRNA surveillance pathway
104549287 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104549287 (UPF3A)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104549287 (UPF3A)
mRNA cycle factors
P-body specific factors
104549287 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104549287
NCBI-ProteinID:
XP_010203547
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
VVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRD
RFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCADEE
KICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRL
REEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKGEEVDVEE
NKWDKSPGSGSTKYKTLEGSLKELKEKSQNDSDKEQRDTERRFREKEPERQRYRLDDGRK
HRTHYEFDKFVRRNEEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKE
RIRNK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtagttattcgacggcttcctccttgtctaactaaggagcaactggaggaacagctacat
cctctacctgcccatgattattttgagttttgcactgctgatccaagcctttatcctcat
ctctactcgagagcatacattaactttagaaatcctgaggacatcctcctttttcgagat
cgctttgatggttatgtcttcattgataataaagggttggagtatcctgcggtggttgaa
tttgctccgttccagaagatttcaaaaaagaagctgaagaagaaagacgccaaagccggg
agcattgaagatgatccagaatataggaaatttttagagagttattgtgctgacgaagag
aaaatctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagggaactc
attgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaaaagcag
agaatacgagaagagaaaagagaagaacgaaggcggagagaattggagaagaaacgtctg
cgggaggaggagaagaggaagcgcagggaagaggaaagacgtaaaaggaaagaagtggag
aagcaaaagaaaatttctgagaaagaaataaggatcaagcttctcaagaagcctgagaaa
ggagatgagctggctagtgaaaagcacaaagaaaaaggtgaagaagttgacgttgaggaa
aacaaatgggataaatcacctggatcggggagtacaaagtacaaaactttggagggttca
ctgaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagatacggag
agaagatttcgagaaaaagagcctgaaagacaaaggtatcgattggatgatggcagaaag
catagaactcactatgagtttgacaagtttgtgagaaggaatgaagaagagctgaaatgg
gggaaaggctacaaccaagacagaggaaagaaagggaactacaactacagcttcacagtg
gaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggag
cgcataagaaataag
DBGET
integrated database retrieval system
