KEGG   Colius striatus (speckled mousebird): 104549315
Entry
104549315         CDS       T08355                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104549315 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csti03021]
    104549315 (TAF5)
   03036 Chromosome and associated proteins [BR:csti03036]
    104549315 (TAF5)
Transcription machinery [BR:csti03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104549315 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     104549315 (TAF5)
Chromosome and associated proteins [BR:csti03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104549315 (TAF5)
    STAGA complex
     104549315 (TAF5)
    TFTC complex
     104549315 (TAF5)
    SAGA complex
     104549315 (TAF5)
    SLIK complex
     104549315 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SPT8 WD_LRWD1 Beta-prop_Nup120_160 Tricorn_2nd PEP5_VPS11_N Beta-prop_ACSF4 Cytochrom_D1 RAB3GAP2_N eIF2A VPS8_N VID27
Other DBs
NCBI-GeneID: 104549315
NCBI-ProteinID: XP_010196282
LinkDB
Position
Unknown
AA seq 429 aa
VFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSAGSKSKKQDPNAPPQNRIPLPE
LKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFAD
STVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSF
SPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARL
WATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGP
IHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSM
DNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFTRRNLL
LAAGAYSSQ
NT seq 1290 nt   +upstreamnt  +downstreamnt
gttttctttggcttactgaaagaaccagagtttgatgtccctttggatgatgaagatgaa
gaaggagaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgcaggg
tcaaaaagtaaaaaacaagaccctaatgctcctcctcaaaacagaattcctctgcctgaa
ctgaaagactctgacaagctggataaagtcatgaatatgaaggaagctgcgaggcgtgtg
cgtcttggcccagagtgcctgccctccatctgtttctacacgttccttaatgcttaccag
ggtctgactgcagtggatattacagatgactctagcatgattgtaggaggctttgctgac
tcaactgtcagagtgtggtctgtgactccaaaaaagctacgtagtgtgaaaacagcagca
gacctcagtctcattgacaaagaatcagatgatgtcttggagaggatcatggatgagaaa
acagcaagtgagttgaagattttgtatggtcacagtggacctgtctatggcaccagcttc
agtcctgataggaactatctgctgtcttgttctgaggatggcactgtcagattgtggagc
ctgcaaacattcacatgtttggtgggatataaaggacacaattatccagtgtgggataca
cagttctctccttatggttattactttgtgtcagggggacatgacagagtggctcgtctg
tgggcaacagatcactaccagcctttacggatatttgctggccatcttgctgatgtgacg
tgtactcgatttcatccaaactccaactacattgccacgggctcggcagacaggactgta
cgcctctgggatgttttgaatgggaattgtgtaagaatattcactggacataagggacca
attcattcactggcattttctcctaatggacgattcctggctactggagcaacagatgga
agagttctgctgtgggacattggacatggcttgatggttggagaactgaaagggcacact
gacactatctacgcactcagattcagtagagatggggagattctagcatcaggttcaatg
gataacacagttcgtctgtgggatgcggtgaaggcatttgaagatttagaaacagatgac
tttactacagccactggacatataaacttgcctgaaaactcacaggacttgttacttggt
acatacatgaccaaatcaaccccagtcatacacctccacttcacccgccgaaacctgctg
ctggctgcgggagcctacagctcccagtga

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