Colius striatus (speckled mousebird): 104549496
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Entry
104549496 CDS
T08355
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03250
Viral life cycle - HIV-1
csti04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104549496 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104549496 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csti03400
]
104549496 (SAMHD1)
DNA repair and recombination proteins [BR:
csti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104549496 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
Pdc1_Ge1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
104549496
NCBI-ProteinID:
XP_010206619
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
LPEERLKVLACLNSLRQQHMDVMKVFNDPVHGHIELHPLLVKIIDTPQFQRLRYIKQLGG
TYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQPELDITQRDILCVEIAGLCHDLGHGP
FSHMFDGRFIPLTRPGFKWKHETASVKMFEHLIASNKLEGVMESYNLVLEEDMNFIKEQI
GGPIDEAACEQSWPYRGRQKEKSFLYEIVANRKNGIDVDKWDYFARDCHHLGIQNNFDYK
RLLKFTRVCEVNNQKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKIGNIIEIMITEAFQK
ADKFFKIEGSGGKLFQISTAMEDMEAYTKLTDNIYLEILHSTCPELKEAREILHKIERRE
LYKFLGETQPETRMEIVKNNSLAESIARCKPEKDPPDVELKAEDFIIDVINMDYGMKEKN
PVDNVHFYCKADPYKTVKISKKQVSKLLPMTFAEQVIRVYCTSQDPGVVSAAKQYFIQWC
IKKDFTKPQDSDVVAPHLTPMKQSWQDEGSDPRQRASEPGCKQRLTFG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
cctgccagaagagagactgaaagtgctggcctgcctgaacagcctgagacagcagcacat
ggatgtcatgaaggtttttaacgatccagtgcatggccacattgaattacatccccttct
tgtgaagatcatcgacacccctcagtttcagcgcctcagatacattaagcagctgggggg
cacttactttgtctttccaggagcctctcacaaccgctttgaacactccttgggggtggg
ctaccttgcaggctgtctggttcgggcactgaaggagagacaaccagaactggatataac
ccagcgagacatcctctgtgtcgaaatcgctgggctctgccatgatttgggtcacgggcc
attttcacacatgtttgatggaagatttattccactcactcgcccaggattcaagtggaa
gcatgaaactgcttctgttaaaatgtttgagcacctgatcgcctccaataaactggaagg
agtgatggagtcatataatcttgtgctggaggaagacatgaacttcatcaaagagcagat
aggagggcctatagatgaagctgcctgtgagcaatcgtggccctaccgaggacgacagaa
ggagaaaagcttcctgtatgagatagtagctaacaggaagaatggcattgatgttgacaa
atgggattattttgcaagggactgccaccaccttggaatccagaataactttgactataa
gcgactactgaagttcactcgggtctgtgaagtgaataaccagaagcacatctgcacccg
tgacaaggaggttgggaacttgtacgatatgttccacacccggaactgcctgcaccggcg
agcataccagcacaagattggcaacatcattgaaatcatgataacagaagcctttcaaaa
agcagacaaattctttaagatagaaggttctgggggaaagctgttccagatctctacagc
catggaggacatggaagcctacaccaagctgacagataatatctacctggaaattctgca
ctccacttgtccagagctgaaggaagctcgagagattttgcacaaaatagagcgacgtga
gctgtacaagtttttaggagagactcaacccgaaacaaggatggaaattgtaaagaacaa
cagcctggcagaaagcattgctcgttgcaagccagagaaggatcctccagatgtggaact
gaaggctgaagatttcatcattgatgttatcaacatggattatggaatgaaggagaagaa
tcctgtggataatgttcacttctattgcaaggcagatccttacaagacagtcaagatcag
taaaaagcaggtttccaagctgctgcccatgacgtttgcagagcaggttatccgtgtgta
ctgcacgagtcaggatcccggcgtcgtttcagctgcaaaacagtactttattcagtggtg
tataaagaaggatttcaccaagccacaggacagcgacgtggttgctccccacctgactcc
catgaagcagagctggcaggacgagggcagcgacccgcgccagcgggcgtcagagcccgg
ctgcaagcagagactgacctttggcca
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