Colius striatus (speckled mousebird): 104549566 Help Entry 104549566         CDS       T08355                                  Symbol HTT Name (RefSeq) huntingtin   KO K04533   huntingtin Organism csti  Colius striatus (speckled mousebird) Brite KEGG Orthology (KO) [BR:csti00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csti03019]     104549566 (HTT)    04131 Membrane trafficking [BR:csti04131]     104549566 (HTT)    03029 Mitochondrial biogenesis [BR:csti03029]     104549566 (HTT) Messenger RNA biogenesis [BR:csti03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      104549566 (HTT) Membrane trafficking [BR:csti04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     104549566 (HTT) Mitochondrial biogenesis [BR:csti03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     104549566 (HTT) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_N-HEAT Htt_N-HEAT_1 HEAT HEAT_GCN1 HEAT_EF3_N HEAT_ECM29 Rad26-like_helical_rpts Motif Other DBs NCBI-GeneID:  104549566 NCBI-ProteinID:  XP_010208879 LinkDB All DBs Position Unknown AA seq 1745 aa AA seqDB search MATMEKLTKAFESLRSFQQQQSPAAIPEEPLPRPKKELSTTKKDRVNHCLTICENIVAQS LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYAWLLNV LLGLLIPVDDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDESAVR NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSAASFAASMKGEI TSDLASSSGVSTAGSVGSSAADPTGHDIITEQPRSQHTLQSDSVDLASCDLTSTATEGEE DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA EGQYSGMQIGQLQDEEDETANILQDDSSESFRSSSIALQQPHVLKTMSHSRQPSDSSVDR FTSKEDAADPGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD VRVSVKALAVSCVGAAVALHPESFFSKLYKMPLEAMGEEYEEQYVSDILNYIDHGDPQIR GATAILCGTIINSILIKSRFDVEKWLINVRSSTGNIFSLVDCIPLLQKTLKDESSVTCKL ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG KTESLHRGIHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLTRLVPKLFYNCDQG QADPVVAAARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRV IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSASDEAQRGCTIG MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWNVEEDSNQGAAKQEEP WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG KERESVEQASVPMSPKKGGETSPATRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKA THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTH FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSISSAAKHRADKNAIHNHIRLF EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASERKAVTHAIPALQPI VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS VSTVQLWVSGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRCGENNLPAPE DRSEVKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI HIFKS NT seq 5236 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaagctgacgaaggcctttgagtctttgcgctccttccagcagcag cagagtccggctgccattcccgaggagccgctcccgagaccaaagaaagagctttctact accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaacatagttgctcagtct ctaagaaattctccagaatttcagaaactgctgggaattgctatggaactcttcctcctc tgcagtgaggatgcagaatctgatgtcaggatggttgctgatgaatgccttaataaagtt attaaagctttgatggattccaatcttcctaggttacaattagaactctataaagagata aaaaagaatggtgcttccagaagtctacgtgctgctctgtggagatttgctgagcttgcc catttagttcggcctcaaaagtgcaggccgtacttagtgaaccttttaccctgtctgaca cgaataagtaagaggcctgaagaatcagtacaagagacactagctgcagcaataccaaaa atcatggcagcctttggcaattttgcaaacgacaacgagattaaggttttattgaaggct ttcatagctaatcttaagtccagttcccccactatccgtcgaacagctgcaggatcagca gtgagcatctgtcaacattcgcgaagaacacagtatttttatgcctggttattgaatgta cttttaggcttgttgattcctgtagatgatgatcatcctactcttttaattctgggtgtt ttacttacactgaggtatctcatacctttattgcaacaacaagtaaaggataccagcctg aaaggcagttttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacaactt atacaggtttatgagttgactttgcattacacccagcatcaggaccataacgttgtgact ggagctttagaattattgcaacagctcttcagaacaccaccacctgaacttctccacgcc ctgactgcttcagggggtattgcacaggtcagtgtatccaaagatgaatctgccgtcagg aaccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt cttgcgagaaagcataaaggtaaaatacttcttggtgaggaagagggtttggaggatgat tctgaaacccgatcagatgtcagcgctgcatcgtttgcagcttctatgaaaggtgaaata accagtgacctagcttcttcatcgggtgtatcaacagctgggtctgtaggcagttcagcc gctgatcctaccggacacgatatcattactgagcagccacgttctcagcatacgttgcag tcagactctgtagacctggcaagctgtgatttgacaagtacagctactgaaggggaagaa gatgatgtgcttagccgaagctccagccagatcagtgctgtccagtccgatcccactatg gacttgaatgatggtacacaggcttcctcaccaattagtgatagctctcagactactaca gaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttggagggtgct gaggggcagtattctggaatgcagattgggcagctgcaggatgaggaagatgaaactgca aatattctccaagatgattcatcagaatctttcagaagttcttctattgctcttcaacag cctcacgtgttgaaaaccatgagccatagtaggcagccttctgatagcagtgtagataga tttacgtcaaaagaagatgcagctgatcctggtgatcatgaaaataagccgtccagggta aagggagacataggtcactataccgatggaaattctgctcccttagtgcactgcgtaaga cttctgtcagcctcttttctacttactggggagaaaggagctttagttcctgatagagat gtgagagtcagtgtaaaagctctggcagtaagttgtgttggagcagctgttgcgcttcac cctgagtctttcttcagcaagctgtataaaatgcctcttgaagcaatgggagaagagtac gaggagcagtatgtatcagatattctgaactacattgaccatggagatccccagattaga ggagctacagccattctgtgtggaacaattatcaactccattctaattaaatcacgcttt gatgtggaaaagtggctaataaatgtcagaagctcaacaggaaatattttctccttggta gactgcatacctctgctacagaaaacgctgaaagatgagtcctctgttacctgcaaactg gcttgtacagctgtgaggcattgcatcatgagcttatgtagcagcagttacagtgaactc ggtttacaattaattgttgacctccttacgctgaagaacagctcatattggctggtacgg acagaacttctggaaacacttgcagaggtggactttcggcttgtcagcttcttggaagga aaaactgagagcttgcacagaggtattcatcattatactggtctactaaaacttcaagag agagtacttaataacgttgtaatatgtctacttggagatgaagatccaagagtgagacac gtagctgcagcttcattaacgaggcttgttccaaagctgttttataactgtgatcaagga caggctgatccagttgtggcagcagcaagagaccaaagcagtgtctacctgaaactacta atgcatgaaacacagccaccatctcactttgcagtgagcactatcaccagaacgtacaga ggttacaatatgctgcaaagtccaacagatgtcaccatggaaaacaatctctcaagggtt attgcagcaatttcccatgcattgacaatctccactacaagagcacttacgtttggctgc tgtgaagctttgtgtcttctttccacaacgtttccagtctgcacctggagcgtgggatgg cactgtggtgtttcccagccaagtgcttcagatgaagctcagaggggctgcaccattgga atggctggtatggtcctgtctctcctttcatcagcgtggttcccactggacctctctgca catcaggatgctttgattttgactggaaacttgcttgcagcaagtgctcccaagtgctta aagaatccctggaatgtggaggaagattcaaaccaaggtgctgcaaagcaagaggaacct tggccagctctggcagatcgaactcttgttactttagtagaacagctcttttctcatctg ttgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggccccgcagta aaggcagcgttaccttctctcacaaacccaccttctcttagtccaattcggaggaaggga aaggagagggagtctgttgaacaggcgtctgtgccaatgagccctaaaaagggtggggaa acaagtccagctactaggcaaactgatgctactgggcccgttccaacaagtaaatcttct tcagtaggaagcttttatcatcttccatcatatctgaagttatacgatgtcttgaaagca actcatgctaattataaggttactttggatctccagaacagtaatgaaaagtttgggtgt ttcttacgatctgccttagatgttctgtctcagatcttggagcttgctactcttcaagac attggaaagtgtgtagaagaaatcttgggatacctgaaatcatgttttaacagagaacca acaatggcaacagtgtgtgtacagcagttattgaaaacattgtttgggacaaatctggct tctcagtatgatggcttgtcttcaaatcccaacaaagctcaaggcaaagctcaacgctta ggttcttccaatttgcgacctggtctctatcattattgcttcatggcaccatacacacat tttacccaggccctggctgatgctagtctaaggaatatggttcaggccgagcaggaacat gatgcttcaggatggtttgatgtcctgcagaaagtttctacacagctgaaaactagcatt agcagtgcagcaaaacatcgtgctgataagaatgctattcacaatcacattcgtttattt gaaccccttgtcataaaagcattgaaacaatatacaacaacaacatcggtacagctgcag agacaagttctagacttgcttgctcaactggttcaactgcgggtgaactactgtcttctg gattcagatcaggtgtttattgggtttgtgttaaagcagtttgaatacatcgaagtagga cagttcagggagtctgaagcaattattcctaatatcttctttttcctggtgttgctgtct tatgagcggtatcattccaaacagataattggaattcctaagattattcagctctgtgat ggtattatggccagtgagaggaaagcagttacacatgcaataccagctctgcaacccatc gtccatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagttggaa acacaaaaggaagtggtagtgtcaatgctactgagacttattcagtaccatcaggtgcta gaaatgttcatcttagtgttgcaacagtgtcataaagaaaatgaagacaaatggaaaaga ctgtccaggcaaatagctgacataattctcccaatgcttgcaaaacagcagatgcatata gattctcatgatgctttgggagtattaaacacactgtttgaaattttggctccgtcatcc cttcgccctgttgacatgcttttaaggagtatgtttgttactcctaaaacaatggcatca gtgagcactgtccagctctgggtttctggaattttagctatccttagagttctgatttca cagtcaacagaagacattgttctgtcccgtatacaagagctttccttttcaccatatttg atttcatgtcaagcaattaaccgactgagatgtggagaaaataacttacctgcaccagag gatcgctctgaggtgaaacaggctaaatatctgcctgaagagacattttctaggttctta ctacaactagttggcattctgttggaagatattgttaccaaacaattgaaagtggacatg aatgagcagcaacatactttctactgccaggagctgggcacgttgcttatgtgcttaata catatcttcaaatcag

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