Colius striatus (speckled mousebird): 104549853
Help
Entry
104549853 CDS
T08355
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04137
Mitophagy - animal
csti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104549853 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104549853 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104549853 (VCP)
03009 Ribosome biogenesis [BR:
csti03009
]
104549853 (VCP)
04131 Membrane trafficking [BR:
csti04131
]
104549853 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csti04147
]
104549853 (VCP)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104549853 (VCP)
Ribosome biogenesis [BR:
csti03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104549853 (VCP)
Membrane trafficking [BR:
csti04131
]
SNARE
SNARE associated proteins
Others
104549853 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104549853 (VCP)
Exosome [BR:
csti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104549853 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_22
TIP49
AAA_2
AAA_14
NPHP3_N
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
ATPase
AAA_7
AAA_18
DUF815
ABC_tran
AAA_24
SLFN-g3_helicase
ResIII
TsaE
Viral_helicase1
NB-ARC
NACHT
Sigma54_activat
Bac_DnaA
bpMoxR
Rad17
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
104549853
NCBI-ProteinID:
XP_010200982
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
LITSVFLTSSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTV
LLKGKKRREAVCIVLSDDSCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL
PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA
PDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP
PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA
PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL
RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSE
AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE
DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD
NT seq
1786 nt
NT seq
+upstream
nt +downstream
nt
actcataacttctgttttcctcaccagttctaaagcagatgacttgtcaactgccattct
gaagcagaagaacaggcccaaccggttaattgttgatgaggccatcaatgaagacaacag
tgttgtgtcactgtcccaggcaaaaatggacgaattgcagctgttcagaggagacactgt
cctgctaaaaggaaagaagaggagagaagcagtgtgcattgttttgtctgatgattcctg
ctcagatgagaagattcgcatgaacagggttgttcgcaacaacctgagagtgcgcctggg
tgatgtgatcagcattcaaccttgcccagatgtgaaatatggcaaacgtatccatgtgct
gccaatcgatgacacagtagaagggatcacagggaatctgtttgaggtctatctcaagcc
atacttcctggaagcatacagacccatcaggaaaggtgacatcttcttggtgcgtggagg
gatgcgtgcggtggagttcaaagtggtggaaacagatccaagtccatactgcatagtggc
tccagacacagtgatccattgtgaaggagagcccatcaaacgagaggatgaagaggagtc
actgaatgaagtgggctacgatgacatcggtggctgccggaagcaactggctcaaatcaa
agagatggtggaacttcccctccgacaccctgcactcttcaaggccataggggtgaagcc
tccacgtgggatccttctttatggtcctcccgggactggtaaaacactgattgcacgagc
agtggcgaatgaaacgggggccttcttcttcctgatcaacggtcctgagatcatgagcaa
gctggctggtgagtctgagagcaacctgaggaaagcctttgaagaagcggagaagaacgc
tcctgccatcatcttcattgatgaactggatgccattgctcctaagagagaaaagacaca
tggagaggtggaacgtcgcattgtgtctcagctgttgactctcatggacgggctgaagca
gagagcacatgtgatcgttatggcagctaccaacagacccaacagcattgacccggcgct
caggcgatttggtcgttttgacagagaggtagacattggtatcccggatgccaccgggcg
cctggagatcctgcagatccacacgaaaaatatgaaactggctgacgacgtggatctgga
acaggtggcaaacgagacccatggccatgttggtgctgacttggctgctctttgctcaga
agctgctcttcaggctatcagaaagaagatggatctcatagacttagaagatgaaaccat
tgatgctgaagtgatgaattcactggctgtgaccatggatgacttcaggtgggctctgag
ccagagcaacccttctgctcttcgggagactgtggtggaggtgccacaagtcacctggga
agatattggtggtctagaagatgtaaagagagaactccaggagcttgtacaatatcctgt
ggagcacccagacaagttcctgaaatttggtatgaccccatcaaaaggggttctgttcta
cgggccccctggttgtggtaagacgctgctggccaaagccattgccaatgagtgccaggc
aaacttcatttccatcaaggggccggaactgctcaccatgtggttcggcgagtctgaagc
caacgtgcgcgagatcttcgacaaggcgcgccaggccgccccctgcgtgctcttcttcga
tgagctggactccatcgcgaaggcccgagggggcaacatcggcgac
DBGET
integrated database retrieval system
