Colius striatus (speckled mousebird): 104549888
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Entry
104549888 CDS
T08355
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104549888 (HELZ)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104549888 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104549888 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104549888
NCBI-ProteinID:
XP_010198118
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLMRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHQDKEQHEQSRNGKSENAAGPEISKIRTPEKKPVESKQVDLEANPQNRSPES
RSSVAYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHLSQIPRQPYPLQQQQNLL
SQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPLQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVSNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDRMHG
NVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRANW
KLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPALP
SPSCNSNHSGHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQPD
GSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLASRAVSAS
SLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYSS
PELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYNVL
QHLGQFPPLMPNKQIVESNSSSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPLS
LFQELSLGSSSGSNGFYSYFK
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcacgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccacccaggggagtcacaagcagtgaagaatat
acactatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacagtgttcgggcagttatatggaaacgttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acgtttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagagaactgtcaggaatggataggaggcaagatggtccagaatgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgactttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttatgagataccaaatccctctgtctgctgaccagctc
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctttatattgaggaaatagcacagtataaggaagtcagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcaccgaaacactttcggaagacact
ttggcaggacggcttgtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgcgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttaccactctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcaaagagtagtagttgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccagggttttttacacacattctgttagatgaagctgcacaagctatggag
tgtgaaactatcatgcctctagcattagctaataaaaacacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgatcggctctatgagcactaccctgcagagtttccatgcagaatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaagaaaagaatagtacagctttttacaataat
gcagaggtgtttgaagtcgtggagcgtgttgaagagttaagaagaaaatggcctgttgcc
tggggcaaattggatgatggcagcatcggtgtggtgacgccttacgccgatcaagtgttc
agaatccgggctgaacttcggaagaaaagactgtctgatgtcagtgtagagagagtgctg
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacgacataca
tgcaaacataagcaaacaccaattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatgggtttttgtccaactacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcaattggaagctttggagttaaagaaaacttacgtgttgaac
ccactggctcctgagtttatcccccgagctcttcggcatcaacattcagcaaataccacg
aaacaacagcagtcaccaccaaagggcaaagtccatcatcataaccagaatgaccatttc
ccacctgatggaattgttcagcctaatccttctgttctaattggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgtgggtctcctatcccttatggcctgggacatcattcaccagttagc
ataggacaacagcagcagcttcagcatcaagacaaggagcaacatgaacaaagtcgaaat
ggtaaaagtgaaaatgctgctgggcctgaaatcagtaaaattcgaacacctgagaagaaa
cctgtggaatccaagcaggttgacttagaagcaaatcctcagaacagaagcccagagtcc
cgttccagtgttgcttatcctaatgctaaattccaccgcaaagataatcttaaccctagg
cagctgaacctacatctcaccccaccccactcgcagtatgcagttcccaatcgccacttc
cagcacctctcacagatacccaggcagccatatcctctgcaacaacagcaaaacctttta
agtcaacaacaaaatcatttgcctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaatcagcagcctccacaacctttgcagctttcccct
gcttaccaggcaggccccagccagtctttttttaataatccaattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaagtc
agtaatcctttgaggcctattgcacagcacaaccccgttctgccaacccacttgaacaac
ttcattgaagagaatccgtcaggaatgcccttaggggacactttagatcgtatgcatgga
aatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaatgaa
cataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcatcta
ccacatcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaactgg
aaacttgccagtaatacagaagatgaaacagaggcaacatattcaagattccaggatttg
ctcagagaactgtcacatcgtgatcaaagtgaaagtcgggacttagctgaaatgccaccc
cctcagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactccct
tctccttcctgcaactctaaccacagtggtcactttcctaacttcactgaaaacaacaga
gacattgaaatacccagtaacccagcatttcagcagcatttaccccaaatctacaatccc
cctttctcaatgccatctgaacatataaccccatctcccttgaaatacctgcaacctgat
ggatcgtggacttatgctaacctacagcagaatcaccttatggggcagggctttcattat
ggtatacctccattgccccacaggtcgcaacaaaacccttttatacagatacagaatcat
cagcacgcagtcggtcaggagccatttcacccactcgcatctcgagcagtatctgcttct
tcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaaga
agaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagt
cttggtcagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactattcatca
cctgagttgtgggtaaactcctcctcatctgccccatacccaaacattccatgcaacgga
gccaacagagcagttccacctcgggagttgttagctccaccgaagacggtcaagccccca
gaggaacacctgaaggccgaaaacatccagctctccaattccttcaactacaacgtgctg
cagcatcttggccagttcccacctctcatgcccaacaagcagatcgtcgagtccaacagc
agcagccaacagaacgccggtgggagcaaaccagtcatgtcctacgcaagtgctctgcgg
gctccaccaaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccctttgtct
ttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctatttt
aaataa
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integrated database retrieval system
