Colius striatus (speckled mousebird): 104550192
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Entry
104550192 CDS
T08355
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104550192 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csti03041
]
104550192 (DDX5)
03009 Ribosome biogenesis [BR:
csti03009
]
104550192 (DDX5)
Enzymes [BR:
csti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104550192 (DDX5)
Spliceosome [BR:
csti03041
]
Complex A
U1 snRNP components
U1 related factors
104550192 (DDX5)
Complex B
104550192 (DDX5)
Ribosome biogenesis [BR:
csti03009
]
Eukaryotic type
Pre-60S particles
Helicases
104550192 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104550192
NCBI-ProteinID:
XP_010196579
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
FGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQ
YRSGKEITVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQ
IVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGK
RGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRA
GNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1780 nt
NT seq
+upstream
nt +downstream
nt
gtttggagcccctcgttttggaggaagtagaggtggacctctctctgggaagaaatttgg
gaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaaatttga
gaagaacttctatcaagaacatcctgatgttgttagacgtactgtgcaagaagttgaaca
atacagatcaggcaaagaaatcacagttaggggccataactgtccaaaaccgattataaa
cttctacgaagcaaacttccctgcaaatgtaatggaggtaattcagaggcagaacttcac
tgaaccaactgctattcaagcacaaggttggcctgttgcattgagtggattggatatggt
tggagtggcacagactggatcagggaaaacactgtcttacttgttgcctgctattgtgca
tataaatcatcagccattcctggagcgcggagatggacccatttgtcttgtgttggcacc
aactcgtgaattggcccagcaagtgcagcaggtagctgctgaatacagccgagcatgccg
tttgaagtctacctgcatttatggaggtgctccaaagggaccacagatccgtgacttgga
aagaggtgtggaaatctgcattgcaacacctggaagacttatagacttcttagaagctgg
aaagaccaatctcaggagatgtacttaccttgtccttgatgaagctgacaggatgcttga
catgggatttgagcctcagatcagaaaaattgtggatcagatcagacctgacaggcagac
tctgatgtggagtgccacatggccaaaggaagtcaggcaactggctgaagactttttgaa
agaatacgtccacatcaacatcggtgcattggaactaagtgcaaaccacaacattcttca
gatagtggatgtgtgtcatgatgtagagaaagatgacaagctcattcgtttgatggaaga
aataatgagtgagaaggaaaacaaaacaattgtttttgtggaaaccaaaagacgctgtga
tgatcttaccaggaaaatgaggagagacgggtggccagcaatgggtattcacggtgataa
aagtcagcaggagcgggactgggttctaaatgaattcaaacacggaaaagcacccatcct
gattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaa
ttatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcag
taccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatga
cctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcagttgat
tgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacagatattctgcgggcaa
aaggggtggatttagtagttttagagagagggagaactttgagagaacctatggtgcact
aggaaagagagactttggagccaaaactcaaaatggggcttacagtgcccaaagtttcag
taatggaactccttttggcaatggctttgcagctgcaggcatgcaggctggcttcagggc
tggtaaccccgcgggtgcttaccagaacggctacgagcagcagtatgggagtaacattgc
caatatgcacaatggcatgaaccagcagcagtatgcgtaccctgccactggggctgctcc
catgataggttacccgatgccgacaagttattctcaataa
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