Colius striatus (speckled mousebird): 104550305
Help
Entry
104550305 CDS
T08355
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04136
Autophagy - other
csti04140
Autophagy - animal
csti04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104550305 (ATG16L1)
04136 Autophagy - other
104550305 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104550305 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csti04131
]
104550305 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
csti03029
]
104550305 (ATG16L1)
Membrane trafficking [BR:
csti04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104550305 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
104550305 (ATG16L1)
Mitochondrial biogenesis [BR:
csti03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104550305 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
ATG16
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_VPS8
ANAPC4_WD40
NBCH_WD40
Beta-prop_EIPR1
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_ACSF4
eIF2A
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_NWD2_C
ASA1
Beta-prop_HPS5
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR41
Tricorn_2nd
Rab11-FIP3
CCDC93_CC
ZapB
HAUS1
Filament
NET2A
INO80F
HEF_HK
Tricorn_N
Vma22_CCDC115
DUF8181
CC_Bre1
Prominin
CCDC39
Ice1_1st
Fez1
Leu_zip
PALB2_WD40
DUF6383
FlaC_arch
BEGAIN_coil
CCDC18_2nd
Syntaxin_2
CRWN_N
Tup_N
WHD_CYT4
CtIP_N
DUF2332
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
104550305
NCBI-ProteinID:
XP_010193884
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MQQKDKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNAL
EEKLRKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEP
DDDIEVLADETSDTAEETSPVRAGTRPASKRLSQPAGGLLDSITNIFGRRSVSSFPAPQD
NVEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRC
EPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKF
LLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDI
RTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSD
WTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSSINAVAWSPAGTHVVSVD
KGNKAVLWSEF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaaggacaaagagatgcagatgaatgaagcaaagattgcagagtatttacaa
aagatctctgaactggaaacagagtgccaggagttgcgcagcaagctgcaagaccttgag
cgagctaatcagacgctgaaggatgagtatgatgctctccagatcaccttcaatgccctg
gaggagaaactgaggaaaactacagaagacaaccaggagctggtctcacgttggatggca
gagaaagcacaagaagccaatcgtttgaatgcagaaaatgaaaaggattccaggagacga
caagccaggctgcagaaggagctggcagaagctgccaaagaacccctgcctgttgaaccg
gatgatgatattgaggtgctggcagatgaaacctccgacacagccgaggagacgtccccg
gtgcgagccggcacccggccagccagtaagcgactctcccagccagctggaggccttctg
gactctatcactaatatctttgggaggcgttctgtgtcctcgttccctgctccccaggat
aatgtagagccacatccaggtgccagtaaagaagtgagagtgcccactactgccatatgt
gtctttgatgcccatgatggggaggtgaacgcagtgcagttcagccctggctcccggttg
ctggcgacaggaggcatggaccggagggttaagctttgggaagtcctgggagataggtgt
gagcccaaaggttccctctctggtagtaatgctgggattacaagcatagaatttgatagt
gctggttcttacctcttagcagcatcaaatgactttgccagcagaatctggacagttgat
gacaatcgattacggcacaccctgacggggcacagcggcaaagtgctgtcagccaagttc
ctgctggacaacgcgcgcatcgtgtcggggagtcacgacaggaccctcaagctctgggac
ctccgcagcaaagtttgtataaaaacagtgtttgcaggatctagctgcaatgacatcgta
tgtactgagcaatgtgtaatgagtggacattttgataagaaaatccgtttctgggacatc
aggactgaaagcatagtaaaagaactggagctgcttggaagaatcacagctcttgacctg
aactcagagagaacagagctattgacctgctcccgtgatgatctactgaagatcattgac
ctgcgggttggtgctgtcaagcagacgttcagtgcccagggattcaagtgtggctctgac
tggacaagagttgtgttcagccctgatggcaactatgtggctgctggttcagctgatggg
gctctctatgtttggaatgtgctgactgggaaattggagaggacacttgcaaagcatcac
agttcttctatcaatgcagtcgcgtggtccccagcgggtacccacgttgtcagtgtggac
aaaggaaacaaggctgtcttgtggtctgagttctga
DBGET
integrated database retrieval system
