Colius striatus (speckled mousebird): 104550455
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Entry
104550455 CDS
T08355
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55
KO
K10654
tripartite motif-containing protein 55
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104550455 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csti04121
]
104550455 (TRIM55)
Ubiquitin system [BR:
csti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104550455 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
TFA2_Winged_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
104550455
NCBI-ProteinID:
XP_010196418
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MPLEKLGMSTSLSYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASD
IFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQEST
RPERKCDQPMCEEHEDERINIYCLNCEMPTCSLCKVFGAHKDCQVAPLTNVYQQQKSELS
DGIAVLVGTNDRVQGIVTQLEETCKTVEECCRRQKEQLCEKFDYLYSVLEERKNEMTQII
TRTQEEKLEHVRSLMKKYADHLEAVSKLVESGIQFMEEPEMAVFLQNAKTLLQKITEASK
GFQMEKLEDGYENMNQFTVNLSREEKIIREIDFDREEEGEEEEEETVDGEGLDEVRTESS
EEEEQEEVEEERAERVSQPPQQDLEPQSAAGGPSAEPTPAPVPVAVSVPVAVPTSPEPQD
EAVTPGGSQQTAESDPQVPATAETIDPLFYPSWYKTQSRQSSSPTPVSGLEKVGPPVSLE
TSAKKAETPAEAAIEETAPESGKESNTTAATSKTSSEPSPQGQVEETPVSNERGNEPARH
IFSFSWLNSLNE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggaaaagctagggatgagcacctccctgagctacaagtccttctccaaagag
cagcaaaccatggataacctggagaaacagctaatttgccccatctgcttggagatgttc
accaagcctgtggtcatcctgccctgccagcacaacctctgccggaaatgtgccagcgac
attttccaggcctccaatccctacctgccgaccaggggaggcacaaccgtggcttcggga
ggccgctttcgctgtccctcctgcaggcatgaagtggtgctagaccggcacggtgtctac
gggctacagaggaacctgttggtggagaacatcatcgacatctacaagcaggagtccaca
agacctgaaaggaaatgtgaccagccaatgtgtgaagagcatgaagatgagagaattaat
atctattgtttgaactgtgaaatgcccacctgctccttgtgcaaagtctttggtgcccac
aaagactgtcaagttgctcctctcacaaatgtttaccagcaacagaagtctgagctgagt
gatggcattgcagtcctggtggggaccaacgacagagtgcaagggatagtcacgcagctg
gaggaaacctgtaagactgttgaggaatgctgcagacgacagaaagagcaactgtgtgaa
aaatttgattatctctattctgtactggaagaaagaaaaaatgagatgacacaaataatc
actagaacccaagaggagaaactggaacacgtccgctctctgatgaagaagtatgcggat
catttggaagctgtgtcaaagctggttgaatcaggaattcagttcatggaagaaccagaa
atggctgtgtttttgcagaatgccaaaacattgctacaaaaaattactgaagcatctaaa
ggatttcaaatggaaaaattagaggatggttatgaaaatatgaaccaattcacagtgaac
ctcagtagagaagaaaagataatacgagaaattgattttgacagagaggaggaaggagaa
gaagaagaggaggagacagtggacggtgaaggtttggatgaagtccgcacagagtcatca
gaagaggaggaacaggaagaggtggaggaggaaagagcagagagagtatcacagccacct
cagcaagacctggaaccacagagtgcagcgggagggccctcagctgagcccactccagcg
cccgtgccagtggcagtgtccgtgccagtggcagtgcccaccagcccagaacctcaggat
gaggctgtgacaccgggtggttctcaacagactgcagagtctgatcctcaagtgccggcc
acagcagaaaccatcgatcctttgttttaccctagctggtataagactcagtcacggcaa
tcaagcagtccaacccctgtgagtgggttggagaaagtagggcctcctgtttctctggaa
acaagtgcaaagaaggcagaaaccccagcagaggcagcaatcgaggagactgcaccagag
agtggtaaggaaagcaataccactgcagcgacgtccaagacttcttctgaaccatcccct
caaggacaagtggaggaaactccggtgagcaatgagaggggtaacgagccggctcgtcat
atcttctccttctcctggctgaactcgctgaatgaatga
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