Colius striatus (speckled mousebird): 104550499
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Entry
104550499 CDS
T08355
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04020
Calcium signaling pathway
csti04080
Neuroactive ligand-receptor interaction
csti04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104550499 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104550499 (GRIN1)
04082 Neuroactive ligand signaling
104550499 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csti04040
]
104550499 (GRIN1)
Ion channels [BR:
csti04040
]
Ligand-gated channels
Glutamate (ionotropic)
104550499 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
104550499
NCBI-ProteinID:
XP_010208224
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
VYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSH
QANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKAEKVLQFDPGTKNVTS
LLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGV
IGLQLINGKNESAHISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLM
SSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGET
EKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGR
PTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSG
QADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGL
SVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLGIGEGAPRSFSARI
LGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDI
YFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGE
LFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFE
NMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSK
CIPEHALRTSGIHFGYPRAVAEPDLVTPSPVGKVTLI
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
gtctatgcaatattagttagtcaccctcctgctcccaacgatcacctaacaccaacaccc
gtatcatacacagctggcttctacaggatccctgtcattggtctgacaacacgcatgtct
atatattctgataagagcatccacctgtcctttttgcgcacggtcccaccctactctcac
caggccaacgtctggtttgagatgatgagagtcttcaactggaatcacgtcatcctgata
gtcagcgacgaccacgaaggtcgtgctgcacaaaagaagctggagacgctcttggaggag
agagagtccaaggctgagaaagtgcttcagtttgaccctggaaccaaaaatgtgacgtcg
ttgctgctggaggctaaggagctggaggctcgggtcatcatcctttctgccagtgaggat
gatgcggccacggtgtacagatcagcagccatgctcaatatgacaggctccggctacgtg
tggctggtgggggaacgggagatatcgggcaatgccctgcgttacgcccctgatggagtg
atcggtttgcaactcatcaacgggaagaacgagtcagcccacatcagtgacgcggtggca
gtggtggcccaggccgtgcacgacttgtttgagaaggagaatatcacagacccgcctcgg
ggctgtgtgggcaataccaacatctggaagacaggaccccttttcaagagggtgttgatg
tcttccaagtactcagagggtgtcacgggccgggtggagttcaatgaggatggggacagg
aagtttgccaactacagcatcatgaacctgcagaaccggaaactggtccaagttgggatt
tacaacggcagccacgtcttgaccaatgaccggaagattatctggccagggggagaaact
gagaaacctcaaggctatcagatgtcaactaagttgaagatcgtgaccatccaccaagag
ccctttgtgtatgtgaagcccacacaagcagatgggacctgcagggaagagttcaccatc
aatggagatcctgtgaaaaaagtcttttgcactggacccaatgagaccattccaggccgt
cccaccgtggcactgtgctgctacggcttctgcatcgacctgctcatccggctggcaggg
gtgatgaacttcacttatgaggttcacctggtggctgatggtaaatttggtacccaagag
cgggttaacaacagcaacaagaaggagtggaacgggatgatgggggaactgctgagcggc
caagcagacatgattgtggctcccctcaccatcaacaatgagcgggcacagtacatcgag
ttctccaagcccttcaagtaccagggcctcaccatccttgtgaagaaggaaattccccgc
agcaccttggactcgttcatgcagccattccagagcacgctttggctgctggtggggctg
tctgtgcacgtggtggcagtgatgttgtacctcttagaccgattcagcccctttggccgg
ttcaaagtgaacagtgaggaggaggaggaagatgccctgaccctctcctcagccatgtgg
ttctcctggggagtcctaggcattggagaaggtgctccccggagtttctctgcccgtatt
cttggcatggtgtgggctggctttgctatgatcattgtggcctcatacactgccaacctg
gcagccttcctggtgttagaccggcctgaggagagaattacaggcatcaacgacccccgg
ctgcgcaacccctctgacaagttcatctacgccacggtgaagcagagctcggtggacatc
tacttccgacggcaggtggagctcagcaccatgtaccggcacatggagaagcacaactat
gagagcgctgccgaagccatccaggcagtcagggacaacaagctccacgccttcatctgg
gactcggcggtgctggagttcgaagcctctcagaagtgtgacctggtgacgacgggggag
cttttcttccgctctggcttcgggatcgggatgcgcaaggacagcccgtggaagcagaac
gtctccctggccatcctcaagtcccacgagaacggcttcatggaggatttggacaagact
tgggtgaggtatcaggagtgtgattcccgtagcaatgccccagcaacactcacctttgaa
aatatggcaggtgtgtttatgctggtggctggaggtattgttgccgggatatttttaata
ttcatagaaatagcttacaaaaggcataaggacgcgcggaggaagcagatgcagctggcg
tttgcggccgttaatgtgtggaggaaaaacctgcagagagaactgagaaggaggagcaaa
tgtatccccgagcatgctctacgcaccagcgggatacattttggttacccccgtgcggta
gcagagccagacctggtcactccgtcccccgtcggaaaggtcacactcatt
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