Colius striatus (speckled mousebird): 104550517
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Entry
104550517 CDS
T08355
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104550517 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csti03021
]
104550517 (SMARCA5)
03036 Chromosome and associated proteins [BR:
csti03036
]
104550517 (SMARCA5)
Transcription machinery [BR:
csti03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104550517 (SMARCA5)
Chromosome and associated proteins [BR:
csti03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104550517 (SMARCA5)
RSF complex
104550517 (SMARCA5)
WICH complex
104550517 (SMARCA5)
B-WICH complex
104550517 (SMARCA5)
NORC complex
104550517 (SMARCA5)
BRF complex
104550517 (SMARCA5)
NuRF complex (fruit fly)
104550517 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
104550517
NCBI-ProteinID:
XP_010196300
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
ESFDDASPGKQKEIPEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGK
LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS
TLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF
NSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKM
QREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLV
TNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQ
ASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQT
KTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGAT
HVFASKESEITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY
REKQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLT
QGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEK
IMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML
HKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKE
KAEKKKRGPKPSSAQKRKMDGTPDGRGRKKKLKL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
gaatcttttgatgatgcatcaccaggaaaacaaaaagaaattccggaagcagatcctaca
tacgaagagaaaatgcaaacagacagagcaaacagatttgagtatctgttgaagcagact
gagttgtttgctcatttcattcaacctgctgctcagaaaactccaacttcacctttgaaa
atgaaacctggacgtccacgaataaagaaggatgagaaacagaatttactgtcagttggc
gactaccgccatcgtagaacagagcaggaagaagatgaagagctgttaacagaaagctcc
aagacaaccaacgtctgcactcgatttgaagaatctccatcatatgttaaatggggaaag
ctgcgtgattaccaagtccgaggactgaactggcttatctctctctatgaaaatggcatc
aatggtatcctagcagatgaaatgggtcttgggaagacgctgcaaacaatttctctgctt
gggtatatgaaacactacagaaatattcctggtccacacatggtgttagttcctaaatct
actctgcataactggatgaatgaatttaagagatgggttcctacacttcgagcagtttgt
ttgataggtgacaaagaccaacgagctgccttcgtcagagacgtgttgttgcctggagaa
tgggatgtctgcgtaacatcatatgaaatgcttatcaaagagaagtcagtattcaaaaag
tttaactggagatacctagttatagatgaagcccacaggattaaaaatgaaaaatcaaag
ttgtcagaaattgtgagggaattcaagacaacaaatcggctgctattaactggaactcca
cttcagaataacttacacgaactctgggcacttctgaacttccttttgccagatgtcttt
aactcatccgaagactttgattcatggtttgatacaaacaactgtttaggggatcaaaag
ttggtggaacgtcttcacatggtgctacgaccattccttttacgtcgcattaaggctgat
gtagagaaaagcttgcctcccaagaaggaagttaaaatttatgtgggtctcagcaaaatg
caacgggaatggtatacacgaatcttaatgaaggacatagatatcttgaattcggctggg
aaactggacaaaatgagactgttgaatatcctcatgcagctgcgcaaatgttgcaatcat
ccatatctctttgatggagcagaacctggtccaccctacacaacagatatgcatttggtc
accaacagtggcaaaatggtagtactggacaaattgcttccaaagttgaaagaacaaggt
tcaagagtcttaatcttcagtcagatgaccagagtcctagatatcttggaagactactgt
atgtggcgaaattatgaatattgtcgactggatggacaaacaccacacgacgaaagacag
gcatctattaatgcatataatgaacctggaagctcaaaatttgtgttcatgttgagtaca
cgggcgggagggcttggaatcaatttggctactgctgatgttgtaattctgtatgattca
gactggaacccacaagtagatcttcaagctatggatcgagcacacagaattgggcaaaca
aagactgttcgtgtgttcagatttatcacagacaacactgtggaagaaagaatagtggaa
cgtgcagaaatgaaactccgtctggattccatagtcattcagcaaggaagactggtggat
caaaacctgaataaacttgggaaggatgaaatgctgcaaatgattagacatggagcgaca
cacgtgtttgcctcaaaggagagtgagattacagatgaagatattgatcacattttggaa
agaggcgcaaagaagactgcagaaatgaatgaaaaactttcaaagatgggtgaaagctca
ctcaggaatttcacaatggatacagagtccagcgtgtataattttgaaggggaagactac
agagaaaaacagaagatggcatttacagagtggattgaacctcctaaacgagaaagaaaa
gccaattatgctgtggatgcttacttcagggaggcgcttcgagtcagtgagccaaaagca
cccaaggcaccacgacctccaaaacagccaaatgtacaggactttcagttctttcctcca
cgcctgtttgaacttttggaaaaagagattctctactataggaaaacaattgggtacaag
gtacctcgtaatcctgatctgccaaatgcagcccaagcacaaaaggaagagcagcttaag
attgatgaggctgaacctcttaacgatgaagaactagaagagaaagagaaacttctaacc
cagggattcactaactggaataagagagattttaaccagttcataaaagccaatgagaag
tggggccgtgatgacattgaaaatatagcacgagaagtggaaggaaaaactcctgaagaa
gtcatcgagtattcagctgtcttctgggaaagatgtaatgaactgcaagacatagagaag
atcatggctcagatagaaagaggagaagccagaattcagagacgaatcagcataaaaaaa
gcacttgatacaaagattggcagatacaaagcccctttccaccagctaagaatatcatat
ggtactaataaagggaagaattacactgaggaggaagatcgctttctcatttgtatgctt
cacaagctggggtttgacaaagaaaatgtctatgatgaattaaggcagtgtatccggaac
tccccgcaattcagattcgactggtttctcaagtccagaactgcaatggagctgcaaagg
cgatgcaatactttgatcaccctcattgaaagagaaaacatggaactggaagaaaaggaa
aaggcagaaaagaagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatggat
ggtactcctgatggacgtggaaggaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
