Colius striatus (speckled mousebird): 104551001
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Entry
104551001 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04010
MAPK signaling pathway
csti04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104551001
04020 Calcium signaling pathway
104551001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csti04040
]
104551001
Ion channels [BR:
csti04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104551001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
104551001
NCBI-ProteinID:
XP_010200612
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
PDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSD
GGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLF
GCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVA
LMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFDDDFEKLKDLRATEMKMYS
LAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSYD
QKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDD
DSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPTMRHSLSISPVAVLPAEYQDCNG
KMVHVPSEFFLHVDGHKEDAADYEDDMEDSYCYRIRKVLEPYKPQWCKTHEDWSLYLFSP
QNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPHSTERVFLSVSNYIFTAIF
VAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLR
LLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYC
DGPDVKNITTKTDCTNAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGI
DQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLR
RLEKKRRKAQRRPYYADYSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSL
DEALKYCNYVFTIVFVFEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNA
ALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAA
LGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTRED
KHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMS
RGTTTLATAHQVXANKPPACAASLGPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAK
APFPLHEVEMETYPCKSQRGSITSIRSQPVGTCSSLRVPTESLQLAVHSPSHDGRHRWKI
LPPDVTPRSPTLNKLLCRQEAIRRDSVDGQAAGRKDSLPAEPGDT
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
ccggacgagttgaccaacgccttggagatcagtaacatcgtcttcacaagcatgtttgcc
ctggagatgctcctgaaactccttgcctttggcctctttggctacatcaagaacccatac
aacatctttgatgggatcatagttgtcatcagtgtctgggagatcattggccaatcggac
ggaggcctctctgtgctacggactttccggctgctccgggtgctcaagctggtgcgtttc
atgcctgcccttcgtcgccagctggtggtcctgatgaagaccatggacaatgtagctact
ttctgcatgttgcttatgctcttcatctttatcttcagcattcttggcatgcatcttttt
ggatgcaagttcagcctgaaaactgatacaggagatacagttccagacagaaagaatttt
gattccttactttgggccattgtgaccgtttttcagatcctcactcaagaagactggaat
gtggtcctttataatgggatggcatctacatcctcatgggcagcactctactttgtggcc
ctgatgacctttggcaattatgtactcttcaaccttcttgttgccatcctggtggaaggc
ttccaggcagagggtgatgccaataggtcagacacagatgaggataagacatctgccaac
ttcgatgatgattttgagaagctgaaagacctccgagcaacagagatgaagatgtactca
cttgctgtcaccccgaatggacacctggagggcaggggaagcatgccacctccaataatc
atgcgcactgctgctacaccaatgcccacaccaaagtgttccccacacatggattcagtg
cacacttttgtggactcaaggagagggagtaacgcttctctggaccccttgagctatgat
cagaagtccttgtccagcctccgcagttccccttgtgccaactggggcaccagcagcaac
tggggaagccgccgctcgagctggaacagcctgggcagagccccaagccttaagaagaag
aaccagtcaggagaaagggagtccttgctgtctggggagggaaagggcagcacagacgat
gactccgatgatgccaagtccagcacagtcagcaggccctcattgcaccgccgggcagag
tccctggactaccgcagctccctggatttacccgagctgctccaactgcccaccatgcgc
cactcgctcagcatcagccccgtggccgttctgcctgccgagtaccaagactgcaatggc
aagatggttcacgtccccagcgagttcttcctgcatgtcgatggccacaaggaagatgct
gcagactatgaggatgacatggaggatagttactgctaccggattcgtaaagtcctggag
ccctacaagccacagtggtgcaagactcatgaagactggtctctctacttgttttcacca
cagaatcggttccgagtgatgtgccagaaggtcattgcccacaaaatgtttgatcacgtg
gtactagtcttcatatttctcaactgcatcactatagcactggagcgaccagacatagac
ccacacagcacagaaagggtattcctaagtgtttctaattacatcttcactgcaatcttt
gtagctgaaatgatggttaaggtggtagctcttggctttttctctggggagaacacctat
ctgcagagcagctggaatgtcctggatggagtcctggtctttgtgtctatcattgacatt
attgtctccatggcatcggcgggtggagcaaagatcctgggtgtccttcgtgttttgaga
cttctgcggaccttgagaccccttcgagtcatcagcagagccccgggtctgaagctggtg
gtagaaaccttgatctcctccttaaggcctattgggaatattgttctcatctgctgtgct
ttcttcattatctttgggattttaggagtccagctttttaaaggcaagttctactactgt
gatggtcccgatgtaaaaaacatcactacgaagactgactgcactaacgcacactacaga
tgggttcggcggaagtacaattttgacaacttgggacaggccctcatgtccttgtttgtc
ctttcctccaaagacggctgggtgaacatcatgtacgatggtttggatgctgtgggtatt
gaccaacagcccatccagaaccataacccatggatgcttctctacttcatctccttcctg
ctcatcgtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaactttcac
aagtgccgacagcaccaggaggcggaggaggcccggcggcgggaggagaagcggctgaga
cgcttggagaaaaagcgcaggaaagcccaacgcaggccttactatgctgactattcccca
gcacggaagtacattcacaccctctgcaccagccactatctggacctcttcatcacattc
atcattggggtcaatgtcatcactatgtcaatggagcactacaaccagccaaagtccctg
gatgaagccctgaagtactgcaactatgtgttcaccatagtttttgtgttcgaggcactt
ctgaagttggtggcgtttggttttcggaggttctttaaggacaggtggaatcagctggat
ttggccatagttctcttatcaattgtgggaatcacactggaggaaattgagatgaatgct
gcactgcccatcaatcccacaataatacgcatcatgcgggtgctgagaatagcaagagtg
ctgaaactgcttaaaatggccactgggatgcgagctcttctggacacagtggtacaagca
cttccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgctgcc
ctgggagtggaattgtttggcaagctagactgcagtgaagaaaatccttgtgaaggtctg
agccggcatgcgactttcaccaacttcggcatggccttcctcaccctcttcagggtgtcc
acaggggacaactggaatggtatcatgaaggacactctacgggaatgcactcgggaagac
aagcactgcctcagttacctgcctgttatctctcctgtctactttgtcaccttcgtcctc
atcgcacagttcgtcctggttaacgtggtggtggcagtgctgatgaagcacttagaggag
agcaacaaggaggccaaggaggatgctgagatggatgctgagatcgagttggagatgtcc
agaggaacaaccaccttggccaccgctcaccaggtgtgagccaacaagcctcctgcctgc
gcagcctctctggggccacaggactcgcagaacctgctgacagtccgcaagatctctgtg
tcccggatgcactccttgcccaacgacagctacatgttccggcccgtgatgccagccaaa
gcccctttccccctgcacgaggtggagatggaaacgtatccctgcaaatcccaaagaggg
tccatcacctccatccgctcccagcccgtgggaacctgttcctctctgcgagtcccaaca
gagtccctgcagctggcagtccactcccccagccacgacggccgtcaccgctggaagatc
cttccccccgacgtcacaccccggtctcctacactcaacaagctgctgtgcagacaggag
gccattcgaagggactcagtggacgggcaggcggcaggccgcaaggacagcctcccagca
gagcctggagacacg
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