Colius striatus (speckled mousebird): 104551516
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Entry
104551516 CDS
T08355
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104551516 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104551516 (EXOSC8)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104551516 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PylC-like_N
Motif
Other DBs
NCBI-GeneID:
104551516
NCBI-ProteinID:
XP_010194750
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MGFDEELNLMRNLLEFNEEEHKIPHLRMNTSGTNICCGPPGWKTKRVMRMVKELGHLSCF
IEQHFLSSGSITTADGSALVKLGNTTVICGVKAELAAPAADSADKGYIVPNVELPSLCST
RFRSGPPGEEAQAASQFIADVIESSQVIAKEDLCIANGKLAWVLYCDIICLDYDGNILDA
SVFALLAALKNVQLPSVTINEETGLSEVNLKQKNPLVVRKHPVATSFAVFDDTLLIVDPT
AEEEDLATGTVTVVTDDEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKTLIDKVIK
SIKPK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgatgaggaactgaatttgatgaggaatctcctcgaattcaatgaggaggag
cacaaaatcccacacctgaggatgaacacctcaggcaccaatatatgctgtgggccaccc
ggctggaaaacaaaaagagtcatgaggatggtgaaagaactgggtcacctctcctgtttt
attgaacagcactttctctcttcaggttctattacaactgcagatggttctgccctggtg
aagttaggaaataccacggtgatttgtggagttaaagcggaacttgctgcacccgcagca
gattctgctgacaagggatacatcgttccaaatgtagagctgccatccctgtgttcaaca
aggtttcgctctggcccacctggcgaagaggctcaagcagcaagccagttcattgcagat
gtgattgaaagttcacaggtaatagcaaaggaggatctgtgtattgcaaatggcaagctt
gcctgggtgttgtactgtgatatcatatgtctggactatgatggaaacatcttggatgcc
agtgtcttcgctttgttagcagcattaaaaaatgtacagttgccatcagttactataaat
gaagaaactggtttgtcagaagttaatttaaagcagaagaatccgttggttgtcagaaag
catccggttgccacatcatttgctgtatttgatgacacattactcatcgttgatccaact
gctgaagaagaagacttagcaactggaacagtaactgttgtaaccgacgatgagggcaga
ctgtgttctgtccataaaccaggtggaagtcctcttacaggagccaagcttcaggactgt
atcaccagagcaattacaagacacaaagaagtaaagacgctgatagacaaagtaataaaa
agtataaagcccaagtga
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integrated database retrieval system