Colius striatus (speckled mousebird): 104552147
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Entry
104552147 CDS
T08355
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csti03009
]
104552147
03036 Chromosome and associated proteins [BR:
csti03036
]
104552147
Enzymes [BR:
csti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104552147
Ribosome biogenesis [BR:
csti03009
]
Eukaryotic type
Pre-60S particles
Helicases
104552147
Chromosome and associated proteins [BR:
csti03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104552147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
104552147
NCBI-ProteinID:
XP_010198067
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
RKPGAGESRRYLRVTPAFPRQKRRGKAEGEQAQPEESGLGEGHLQAPQPKKTRKTDESNV
SEGTVKPSSAVSSDAASGEQDSDAEVELTEEAKEGAFSNFPLSQNTINLLKARGVKYLFP
VQVETFHPIYDGKDVIAQARTGTGKTFSFAVPLIEKLQSVSQDGRRGRAPKVLVLVPTRE
LATQVAKDFKNLTRRLSVGCFYGGTPYKEQLDLLKSGIDILVGTPGRIKDHIQNSKLELS
SVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSATCPRWVYDVAKKYMR
DEYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSRGRTIVFCETKKEA
NELAMNASLKQDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQ
CSPPKDVDSYIHRSGRTGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRVGVPSATDV
IKASSSDAKKLLEAIPPSAVDYFRKSAQELIDEKGAVAALAAALAHISGASYIQQRSLLN
STAGFVTMVLKCSVEMHTMSYAWRGLKEQLGEEVDGKISAMRLLKGKMGVCFDIPADELS
NIQEQWRDTRRWQLSVAKELPELEEYPQEAGRGFSRFGNGRKGDGGFKRNNWFKNGN
NT seq
1975 nt
NT seq
+upstream
nt +downstream
nt
gaggaagcccggggcgggcgagagcaggcggtacctccgcgtaacgccggctttccctcg
gcagaagcggcgcggcaaggctgagggagagcaggcccagcccgaggagagcggcctggg
cgagggtcatctgcaggccccgcaacccaagaagacgagaaaaaccgacgagagtaacgt
ctctgagggtacagtgaaaccctcctccgctgtcagcagcgacgcggcctctggagagca
ggacagcgatgcagaggtagagctgacagaagaagcaaaagagggtgccttctccaattt
tcctctctcccaaaacaccatcaaccttctcaaagctcgaggtgtgaagtacctgttccc
tgtccaagtggagacttttcatcccatctatgatggcaaagatgtgattgctcaggctcg
aaccgggactgggaaaaccttttcttttgccgttccactgattgaaaaactccagagtgt
ctcgcaagatggaagaagaggccgggcaccaaaagtgctggttcttgttccaaccaggga
actggccactcaggtagccaaagacttcaagaatctcaccaggagactgtcagtgggttg
tttttacggaggaactccatataaagaacagcttgatctccttaaaagtggcatcgatat
tctagtgggaacacctggtcggatcaaagaccacattcagaatagcaagctggaactttc
cagcgtgaagcatgttgttttggatgaagttgatcatatgttagacatgggctttgctga
acaagtggaagaaatcttaggatttgcatataaaaaaggttctgagaacaacccacagac
actgctgttctctgcaacttgtccacgatgggtatatgatgtggcaaaaaaatacatgag
agatgaatatgaacagattgacctgattggcaagaagactcaaaggactgcaacgactgt
ggaacacttggctatacagtgtcgctcatctcagagagcaggagttcttggagatatcat
tcaggtctacagtggcagccgaggacggaccattgtcttttgtgagaccaaaaaggaagc
aaatgaactggctatgaatgcttcactcaaacaggatgcccagtccttgcatggtgacat
tccacagaaacaaagagaaattacattaaagggcttcagaaatggtgtgtttgaagttct
gattgcaacaaatgtagctgcccgtggtttggatattcctgaggttgaccttgtcataca
gtgttcaccacccaaagatgttgattcctacatccatcgctctggacggacgggtcgagc
tggccggactgggatctgcatttgtttatttcagagaagagaagaagatcttctgaaaca
agttgagcacaaagcggggattacatttaagcgtgtaggtgttccctctgctacagatgt
aattaaagcttcaagtagtgatgccaaaaagttgttggaggccattcctccttctgcagt
agactacttcagaaaatctgctcaagagctcatagatgaaaaaggggcagttgctgccct
ggctgcagctctggcccatatctccggggcatcttacatacagcagcgctccttgctcaa
ctcaaccgcgggctttgtgaccatggtgttaaagtgttcagtagaaatgcataccatgag
ctatgcctggcggggactgaaagagcagcttggtgaagaagtagatggcaaaatatctgc
aatgcggctcctcaaggggaagatgggggtgtgctttgatatccctgctgatgaactgag
taacatacaggagcagtggagggacaccaggcgctggcaattgtcagtggcaaaggagtt
gcctgagctggaagagtacccgcaggaggcaggacgaggattctccaggttcgggaacgg
gaggaaaggtgatggtggcttcaagagaaacaactggtttaagaatggaaactga
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