Colius striatus (speckled mousebird): 104553083
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Entry
104553083 CDS
T08355
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104553083 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
csti04091
]
104553083 (FREM1)
Lectins [BR:
csti04091
]
C-Type lectins
Lecticans
104553083 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104553083
NCBI-ProteinID:
XP_010193932
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MKLFQQSWLFLLLPVVLRVACSSFISVNLGMKVMKGQSVFLTEDDLKFSIPREDICKVEV
ELNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTIMLRLYRFTETETFVETFT
LHVQLLEPDCNIIKMRSRALEVPEYYGLSRVIDKNVLTFDYDRKINLDCTISIDSLETHL
PAHGQLITGEVQKEQLRGDQPQSFFPDPKDSLGQHCGNESCMLGLGAVQNTKISCEQFLR
MGIRYQHLDPPSPDTDYIPVRLDLTDRRSKILHKTEYAWLPVQIKGAIPNQIPNAVLTAK
FILEVDQFILTPFTTTVVDSEDSETPKPLLVFNITKPPVQGFITHLSDHTKVVGSFTWKD
LNDMLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTGL
SLLEGQSRPITWQHFQIVDNDDIQNVHLVIVDGLQHGQITVRGRKGFMFTVSDIQAGVVH
YHHDDSDSSKDSVVFRISDGSNSIRHKLPINILPKDDSPPFLISNVVIEVHEGQTVLIQG
SMLHASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYSVSSFLQRDLFNGIIYYHHLG
GEIFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGATRHLVVKETEIAHLT
KKHLHFIDVEEQDRELTYTITTSPFFSCTRSHSDAGKLFMVDTVPKLVKDPAALALRSFT
QHAVNYMKVAYMPPLQDIGPEPQQVQFIFSISNQHGGTLYGICFNITILPVDNQAPEVFT
SHLSVEEGGLSPVTEGHIHISDMDTKQEHLLLLLQRQPQHGAVELDGIPMNEGDRLSCGD
LHTLAVRYRHDGSETLTDDVLFAATDGIHFVEFILQVKVLPMNDELPVMRTGLVPVLHCL
EGEEVVLSSEYLYATDADSDDMKLMFMLARQPYHGVLRKAGIAVDCFSQADVISGLVTYR
HNSGEIGLTPSTEILTFIVCDGEVGRDVKDCCYDGPLPPPVPLRDPFPVYDLNVTVLPVD
NQPPSIATGARFVVEEGSSAAFTTNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSPG
FEKSNIGVSIASFQLKHLKALNINYVQARHLRVEPTADHFVLYVTDGLHRSAETPFFVLI
NPTNDEVPEFITRNMTVQEGEMKELDLSVINAVDLDVPQDHLVFEVVQRPWYGFLINGVH
GNDILHYKQLINHDHHSHGLLVHIFSMELLKNGMKLMYMHDNSENFTDSFKIQLSDGKHK
VLRTISVKVIPVNDEIPALSKKDDIEVNMGETRIISSAVLSAEDKDTPRGRIFYLFEKLP
ENGQLQLKVGQSWTTLQTGMKCTQEELDMNLVRYVHTGAIGTKNQDSFRFYLWDGYNRSP
AVDFYINIKDMEKRDIAVFTKPLRVLKGNLVYITTDVLLALDGTNKPEELLYVITSPPQY
GQIEHVSYPGIPITSFSQMDVARQIVCYVHNTKQVVPEDTFRFIISNGLRTKHGTFIISL
EAVDQDLPTLFRNTGLRIVEGATALLSPDVLQLSDSDTDKENLTFLLAQLPQYGNLYYRG
AVLLQYNFTQQDVNNGNVAYKHRGGDSQTDRFTFVATDMTNQGFIVNGRVQSEPVAFTIQ
VDRLDKVAPKIIRLHCFSDVELLENGKYGIYITTRSLKASDPNTEDDKIFFKILRGPNYG
YLENTTTGGCIQEGFTQKDLTSKVILYVINPLREVNSDSLEFQVTDASGNSAVPQRLELR
WSQIEMQQTEYEVCESLGLLPLKITRAGHSEESAFIAVKVNEISAMLGKDFTVTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCRYSH
SSGQSKHDVWGRGKMFPVSFSSSSPPRPGKAPMEGIPLPPPTGMREHGGDLRQAHSSTNW
SRTRLRVTGNGRIVHPSSVFRNGTDVVYKYHGMVSLKIEDDTSSTKANKKAQVSVINQAK
PQINVDSFRKKEIPQADKAELASKPSSRQQDFNSFPKACTPDLKGLLHYEENSQKLFQCD
GIIWKFWNSQSKEVGTKECPSGWSHYEGSCYFLVVNHKVTWNTAAQACREQYLGRLASVA
NEQHMQWLWNFGGRKPFWIGLNDQVNPGHWEWNGGEPVTYINWRRGSYHFPKRGRNCVLV
QKRGKWKATDCMKVKRNNYICSRKL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctttcagcaaagttggttgtttctactgctgcctgttgtactaagagttgca
tgctcctcctttattagtgtcaaccttggcatgaaagtgatgaaaggacagtctgtcttc
ctgacagaagacgacctcaagttttccatccccagagaggatatctgcaaagtagaagtt
gagcttaatgagccaattacacaaagagttgggaaactaactccacaggtttttgactgt
cacttccttcctaatgaagtcaaatacacccacaatggctgtccaattttagatgaagac
acaatcatgcttaggctgtacaggtttacagaaactgaaacgtttgtagagacattcacc
cttcatgtgcagttacttgagccagactgtaacatcatcaaaatgcgctcccgtgccctg
gaggtccctgagtactatggtctgtctagggtgattgacaagaatgtcctcactttcgac
tatgacaggaagataaatctggattgcactatttccatagactctttagaaacacatctg
cctgctcatggccaactcatcactggggaagtgcagaaagagcagcttcgtggagatcag
ccacagagcttcttccctgaccctaaggacagcctgggccagcactgtggaaacgagagc
tgcatgctgggactgggagctgttcagaacacaaaaatcagctgcgaacaatttctgagg
atggggattagatatcaacaccttgaccctccctcgcctgacactgattatattcctgtg
aggctggatctcacggataggagaagcaaaatcctccacaagactgaatatgcatggctc
cctgttcagattaaaggtgctattcccaatcaaatacccaacgctgtccttactgcaaag
ttcatcctggaagtagatcaatttattttaaccccctttacaaccacagttgttgattct
gaagacagtgaaactccaaagcccttgcttgtattcaacattaccaagccacctgtgcag
ggcttcatcactcatctatctgaccatacaaaagttgttggttctttcacgtggaaagat
ctcaatgacatgctcattgcctatcagcctccaaataacagccacacagagagaaggaat
tatgaggtggaatttgaggtccatgacttctactttgaaaggagtttaccaattactgta
catctttctatcagaacaacagatacaaatgctccccgggtatcatggaatacaggcctc
agcctcctggaagggcaatctcgaccaatcacgtggcaacacttccaaattgtagacaac
gatgatatccaaaatgttcacttggtcattgttgacggcttacagcatggacaaatcaca
gtgagaggacggaaaggattcatgttcacagtctctgacattcaggctggagttgttcac
taccatcatgatgacagtgattcttctaaggactctgtggtatttagaatttccgatggc
tccaacagtattcgccataagcttccaatcaatattctccctaaggatgacagcccacca
tttcttatcagcaatgttgtcattgaagttcatgagggtcagacagtcctgattcagggc
tccatgcttcatgcatctgacatggattccagtgatgattacatactattcaatattacc
aagccaccacaggctggagaaatcatgaagaaaccaggaccaaacttgatagggtattct
gtcagcagttttcttcagagggatctatttaacggaataatttattatcatcatttgggg
ggagaaatatttgaagattcccttgagtttgtgctgtgtgatagccatgaccctcccaat
ctctcagagccacaggtgatgatggtacacattatccctgtggatgatcagctacccaga
gaagccccaggagcaacacgtcacctggttgttaaggagactgagattgctcacctgact
aagaaacacctccacttcatagatgtggaagagcaagatagggaactcacatacaccata
actacttccccatttttctcttgcacacgcagccattcagatgctgggaagctgtttatg
gtggacactgttcccaagctggtcaaggatcctgctgctcttgcactgcggtcattcact
cagcatgctgtaaactacatgaaagttgcgtacatgccaccactgcaggacattgggccc
gaacctcaacaagtccagtttatcttttccatcagcaatcagcatggtggcactttgtat
gggatctgcttcaatattactattcttcctgtggacaatcaagctccagaggtttttaca
agccatttgagtgtggaagagggtggcctgagccctgtcacagagggacacattcatatc
tctgacatggacacgaaacaggagcatctcctccttctcctgcagagacagcctcagcat
ggggcagtggagctggatggcattcccatgaatgaaggtgacaggctttcctgtggggat
ctgcataccttggcagtcagataccggcatgatggctctgagactctcactgatgatgtc
ctctttgcagccacagatggcatccactttgtagagttcatcctacaggttaaggtgttg
cccatgaatgatgagctaccagttatgcgaacaggccttgttcctgtgctccactgcctg
gagggtgaagaagtggtcctctcctcagagtacctttatgctacagatgcagacagtgat
gacatgaaactgatgtttatgctggctcgccagccctaccatggggtattgaggaaagct
ggcattgctgtggattgcttctcccaagctgacgttatctctggtttagtcacatatagg
cacaacagtggggagatcggcctgactccttccactgagatcctaaccttcattgtttgt
gacggtgaggtgggccgagatgtgaaagactgctgctatgatggacctcttcctcctcca
gttccgcttcgagatccatttccagtatatgaccttaacgttactgtacttccagtggat
aaccagcctccatcaattgcaactggtgcaaggtttgtggttgaggagggctcctcagca
gcctttaccaccaaccatttgtttgccactgaccctgacaccactgcagatgatttagag
tttgtcttggtttctcctccccagtttggctacattgaaaatatactaccttctcctggg
tttgagaagagcaacattggtgtaagtatagcttcatttcagctgaagcacctgaaagcc
ctgaacataaactatgtacaagccagacacttgcgagtggagccaacagcagaccacttt
gtactttatgtcactgatgggctgcatcgttctgcagagactccatttttcgtgctgatc
aacccaacaaatgatgaagttccagaattcataacaaggaatatgactgttcaagagggg
gagatgaaagagttggatctctctgttatcaatgcagttgacctggatgtgcctcaagac
catttggtatttgaagttgtgcagaggccctggtatgggtttcttattaatggagttcat
ggcaatgatattctgcactataaacagctaattaaccacgaccaccacagccatgggttg
cttgttcatatcttttccatggagctattgaagaatggaatgaaactgatgtacatgcat
gacaattcagaaaacttcactgacagctttaaaatccaactatcagatgggaaacataaa
gtcctcagaaccatttcagtaaaggtcattccagttaatgacgagataccagcactgagc
aagaaggatgatatagaggtgaacatgggtgaaactcgaataatttctagtgctgttctg
tcagcagaagataaagatacccccagggggagaattttctacttatttgaaaaacttcca
gaaaatggtcagcttcagctcaaggtaggccaaagctggacaactctccaaactggaatg
aagtgcactcaggaagaattggatatgaaccttgtgagatatgtccatacaggagctata
gggaccaagaaccaagacagcttcagattttatctgtgggatgggtacaacagatcccca
gctgtcgacttctacataaatataaaggacatggaaaagagagacattgctgttttcaca
aaacctcttcgagtgctaaaagggaatctggtctacattacaactgatgtcctccttgca
ctagatggtactaacaagccagaggagctcctctatgtgataacttccccaccccagtat
ggacaaatagagcatgtcagctaccctggcattcccattacgagcttcagtcaaatggat
gtagcgagacagatagtctgttatgttcacaacaccaagcaagttgtccctgaagatacg
ttcagattcatcatcagcaatggactgaggactaagcatggaacattcatcatctccttg
gaggcagttgaccaagatttgccaacactgtttaggaacacagggttaagaatagtggaa
ggtgctacagcgctcctttctcctgacgttctgcaactttcagactcagacactgacaaa
gaaaacctcactttcctcttggcccaactcccccagtatggtaatctctattaccgaggg
gctgtgctactgcagtacaatttcacccagcaagatgtgaacaatgggaatgttgcatac
aagcaccgaggtggggattcccagactgacagatttacatttgttgcaacagatatgact
aatcaaggtttcatcgtgaatgggagggtgcagagtgagccggtggcattcaccattcag
gtggatcgtttggacaaagtggcaccaaaaattattcgtcttcattgcttttctgatgtg
gaactgctggagaatggcaaatatgggatctatattactaccaggtccctgaaggcatct
gaccccaatacagaagatgacaaaatattttttaagattttacgaggtcctaattatggc
tacctggaaaatacaacaacaggtggatgtattcaggaagggtttacccaaaaggacttg
accagcaaagtcatactttatgtcatcaatccattgagggaagtgaattcagatagcttg
gaatttcaagtcacagatgccagtggaaactctgcagtgcctcaaaggctggagctgcgg
tggtctcagattgaaatgcaacagactgaatatgaagtgtgtgagagcttgggattgttg
cctctgaaaatcaccagggcaggacactcagaagagtctgcctttattgctgtgaaggtc
aatgaaatatctgctatgttgggaaaggactttacagtgactccctccaaacttgttcag
tttgatccaggaatgtcaaccaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaagtctttgaagtagttctgaactcccctgtaaatgctgttcttggcacc
cggacaaaagctgtagtgaaaattttggactcgaaaggaggtcagtgcagatattcccat
tcttctggccaaagcaagcacgacgtctgggggagaggcaaaatgtttccagtttccttc
agctcctcatcccctcccagacctggaaaggctcccatggaagggataccactgcctcct
cctacagggatgagagagcatggaggggacctgcggcaggcacacagctccacaaattgg
tcaaggaccaggctgagggtgactggaaatggcagaatagttcatccttcatctgtattt
agaaatggaactgatgtggtttacaaatatcacggaatggtatcactcaaaatagaggat
gacacctcatcaactaaagcaaacaagaaggctcaagtgtcagtaattaaccaagcaaaa
ccacagataaatgttgactcatttaggaagaaagaaatcccacaagctgataaggcagaa
ctggcatctaaaccaagctccagacagcaggactttaactcttttccaaaggcctgtaca
ccagatttaaaaggactcttgcattatgaagaaaacagtcaaaagttatttcagtgtgat
gggataatatggaagttctggaattctcaaagtaaggaggtaggcacaaaggaatgtccc
tctggatggagtcattatgagggcagctgctacttcctggtagtgaatcacaaggtcacc
tggaacactgctgcgcaggcttgcagagagcaatacctggggagactagcaagtgtggct
aatgaacaacacatgcagtggctgtggaacttcggtgggaggaaacccttttggataggc
ttgaatgaccaagtcaatcctggacactgggagtggaacggaggagaacctgtaacctac
ataaactggagaagaggctcctaccactttccaaagagaggaagaaattgtgtattggtc
cagaagcgaggaaaatggaaggcaactgactgcatgaaggtcaaaaggaacaactatata
tgttcaagaaagctataa
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integrated database retrieval system
