Colius striatus (speckled mousebird): 104553111
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Entry
104553111 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: rotatin-like
KO
K16484
rotatin
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csti03037
]
104553111
Cilium and associated proteins [BR:
csti03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104553111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
DUF445
Motif
Other DBs
NCBI-GeneID:
104553111
NCBI-ProteinID:
XP_010193939
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
HELAEIRERSLKTILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPMKEEVLNLVNSL
IKHPLAAQKMIDIGAVEFFSQLRPDVNPNFQAIIDGIVDGLFFLPSGLPSSSLSVCYQTR
SQPSVDQPEKSFSGYFCQARSHLSQLEIPPKRSSGTCYSYKIRILKCLKFSTFPWLTLTS
TDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPXQRPKIVQSLLSLLNLAFGGDGR
HCLALQAVSCLHQLCIFLRSRLNFHRDPSFSAMEQGTASQNSSYCQEARAPPRSQNPSLG
SSSPRPSVIGRTVQRPRGDGQDWDAASSSGNSTQANANSRISLHSPLDAVHLDLPDIENE
DTLELQMKQLSLPQFCVSILENAIPLLRTGSRRMTMEVLELLVEDMFLIGDAISENVWED
DSLFALELKDKLLLAMGLLGETILYHKTNITAEQPELMFVHHRMAFISISLFSVRLLQIL
LPVEKASKVSQKSLLNALFLLSLDVSFSLEYPNIHESVTAYLEQMSTEDYNTYKQTSEAT
YSIECTCSFMIEVHKKGHENLSELVELAQQALSSLPYHQHFPLLQECIHICSDIWKSDEG
NSLLQAEGQKMLLHLLSHPLLNVKAEAYQCCLEVVKNCLGIHNISNPVSSICRGIHFLLH
PKVLYEICTFGLQEDKNEVNSTAETILMHLLQGQLVMAVLTWNKFIEALCPVIPVLQGYA
DTKDRLGNCILTLSETTSDKGEGVLPRTTRIRAALRLLFSKKQLVRSAALKHLAFHLTNE
EEANLKRPHLHGSVLSSISNLFIIERAIELKLDDKTESIFKAETVEKLYDILTSDAVDLV
LRKSAAEQLSIILEDTKMHGIVKKLGVIEQILSYLNECVHVDGKLMESIMLPCLTLLRKL
VYADPGVRLSLAQQPSLLLLLFRVSLIFQNDHTVLSEATVLLCLLLFDEVARTETWYENN
DTGPPAFSLPVAVVRRYHLPVRITAHHVVSPNTVVVPLSSEHLTMKPVSDMLKMAWNLSW
HHGIENLLQVINYEKQEGIFLDSLKLSSEDILILKITHTNYGLQDCLNSIIQAVSHKDVR
AALTRLSFYVLNDRLALKCSSESCGATLKSFVWQKAINRFLQVLPASAEDEKLLVDILRF
LNKLLREQRSSLESDHVKWFLKSLLKNKPKSLLGLLVRTESQLQDEIDEIQTAVRQQLDK
ELIHFFNTLLFCSMSVTDREGLELAGSFRTELAMKLLQCLRLTDAPHFYGLPSLERTLRG
MVHVTALPDWSTYSPAVEPVTICKKYLTSLLEVISSFYVEWGGNAMSFMGKGVTKSTVLC
LLHLSNEMMAQAKDMDWISLWSLPYDNSEEQVASPLGLAWLVPLWVDRDPEVRFTSLGIG
SALTCLETGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAAFILQNLLVIPIPTE
DVKDCLWQDPCVHDEESGLSQTRRPALKSLLYHCRFYEHVNQMVKRCYLGCYTFDLNSSK
EDNLIIEEEGITDRSYFDDSLNIWKAPSSESRSSHSQSTSETMIQSSSPSLGSVTELQAV
VPTDSATFIPETVVDRLMAQGQSDTTTTESASQHDSPMAAALSKQRAIVTPALLSAVCSL
LHNLLIVTPKDTGTALQQAHLLTALSSLVSANRIERCILELKAPLGHPCHIEHVKTQVLL
LLQYLSSLSKLLKTCLLVDSQLVIHDELLKPLLGNIFSILTICFKDGLDTELTSVLHETW
VDFFNLLATLLWKSGQKSFPFVTAALANHFTTIIDVICDCINLPTAYPALYMASLQFLSV
LLNEEGRRQLQDKQSICQNPTISFLLDHVEGCQKSATQLTTLIIQVWERKSSKDVLKETA
TNALLSLLAVSKNAQKCALE
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
gtcatgaactggcagagataagagaacgatcattgaagactattctgtttaaattagatc
ataacttgatttcatatgctgatctagtccatgaaaaagcgcttttccgtaatcttttgg
aatggttcaattttccagttgtaccaatgaaagaggaagtgctaaatcttgtcaacagtt
tgatcaagcatccacttgctgctcagaaaatgattgacattggtgcagtggaattcttct
ctcagcttcgccctgatgtgaatccaaactttcaggccataatagatgggattgtggatg
gactattctttctcccttctggacttccttctagttctttatcagtatgttatcaaactc
ggtctcagccttcagtagatcaaccagagaaatcgttctctggatacttttgtcaagcta
gaagtcatctgtcgcagttagaaatacctcccaaaagaagcagtggtacgtgttattctt
acaaaataagaatattgaaatgcttgaaattttcaacatttccttggctaactctgactt
cgacagacaggcatgtgctttcatcaaatgaaagctctttgagaagtaacaaccagagtt
taatttggagtacgtgtgagcttcttcaggatgtgattatgcaagattttcctnntcaaa
gaccaaagattgtacagagccttttatctttgctaaacctggcttttgggggagatggaa
gacactgcttagctttgcaggctgtatcatgtctgcaccagttgtgcatcttcttgagaa
gcagacttaattttcacagagatccaagtttttctgccatggagcaaggcacagcttccc
agaattcatcttactgtcaagaagcaagagcaccacctcgttctcagaatccatcgcttg
gaagtagtagccctcggccatctgtgattggacggacagttcagcgtcccagaggagatg
gtcaggattgggatgcagcatcttccagtggaaacagtactcaagcaaatgcaaactcca
gaatctctctgcattccccacttgatgcagtacatcttgacctaccagatattgaaaatg
aggacactttagaattacagatgaaacagcttagccttcctcagttctgtgtttcaatct
tagaaaatgcaatacctcttctaagaacaggcagtaggagaatgacgatggaagttcttg
aattgcttgttgaagacatgttccttattggtgatgctatttctgaaaatgtttgggaag
atgatagcctttttgcattggaattgaaagacaaattgcttctggccatgggtttgcttg
gagaaactatattatatcacaaaaccaatattactgcagagcagcctgagctgatgtttg
tgcatcacagaatggcatttattagcatttcactcttcagtgttagattactgcaaattc
ttctccctgtagaaaaggcgagtaaggtttcacaaaagagtttgctgaatgctttgtttc
ttctatctctggatgtctccttctccttggaatacccaaacattcatgaatctgtaacag
cctatctggagcagatgagtactgaggactataatacttataaacaaacttcagaagcta
cgtattcgatcgaatgcacttgtagctttatgattgaagttcataagaaggggcacgaaa
atctttctgaattagtagaattggcacagcaggccttgagtagtctaccctaccatcagc
actttcccttgcttcaggagtgcattcacatatgctcagatatttggaagtctgacgagg
gtaactcattgctccaggctgagggtcagaagatgcttctgcatctattgtctcatcctt
tgctgaatgtaaaagctgaagcctatcagtgctgtttggaagtggttaagaattgtttag
gtattcataatatttctaatcctgtgtcttcaatctgccgtggaatacattttctccttc
atccaaaagttttatatgaaatctgtacatttggcctgcaggaagataagaatgaggtaa
actctacagccgagaccattctgatgcatctattgcagggacaattagtaatggcagtat
tgacttggaacaagtttattgaggccctttgtcctgtcattcctgttttacaggggtatg
ctgacacaaaagataggctaggtaactgtatcctcactttgagtgaaacaacctctgaca
aaggagagggtgttctccctagaactactagaatacgggctgctctgcgtcttctcttct
caaaaaagcagttagttcgttcagcggcacttaagcatttagcattccatcttacaaatg
aagaagaggcaaacctgaaacgcccacatctgcatggtagtgtgctttccagcatctcaa
acttatttattatagaaagagctattgagctaaaattggatgataaaacggagtcaatat
tcaaggcagaaactgttgaaaagctgtatgacatcttgacttctgatgctgttgacctag
ttttacgaaagtctgcagctgagcagctaagtatcattctagaagataccaaaatgcatg
gcattgtaaagaagttaggtgtgatagaacagattttgtcttaccttaatgaatgtgtac
atgtggatggcaagcttatggaatccataatgttaccatgtctaacactcttacgcaaac
ttgtgtacgctgatccaggtgttcgtctgtccttagcacagcaaccatctttactgcttt
tgctattcagagtttctctgatattccaaaatgatcacactgttttaagtgaagctacag
tattgctttgtcttctgttgtttgatgaagtagcaagaacagaaacatggtatgaaaata
atgatactggcccacctgccttcagtttacctgttgctgttgttagaaggtatcatctcc
cagtcaggatcactgctcatcatgtagttagccctaatactgttgtggtgccactgtctt
ctgaacacttgactatgaaacctgtgtcagatatgcttaagatggcttggaatctttcgt
ggcaccatgggattgaaaacctgttgcaagtgataaattatgagaagcaagaaggaatat
ttttagactcactaaaactgtcttcagaagacattcttatcctcaaaataactcatacaa
actatggactgcaggattgtcttaattcaatcattcaggcggtatcccacaaggatgtca
gggctgctcttactaggcttagtttttatgttttgaatgacagacttgcattaaaatgta
gttctgaatcttgtggagccactttgaagagctttgtttggcaaaaagcaataaacaggt
ttctgcaagttcttccagcttctgcagaggatgagaagcttttagtagatatcctaagat
ttttaaacaaattgcttagagagcagagatcaagtttggagtcagaccatgtaaagtggt
tcttgaaatcattgcttaaaaataagccaaaatcccttttgggccttctggtgcggacag
aatctcaactgcaggatgaaatagatgaaatacagactgctgtcaggcagcaactggata
aagaactcattcatttttttaacacattgttattttgttccatgtcagtgaccgacagag
agggcctggaacttgctggctctttcagaactgagctggcaatgaagctgctacagtgct
taaggctaacagatgcaccacacttttatggacttccttcactggagaggacattacgag
gaatggttcatgtcactgcacttccagactggagtacctactctcctgcagttgaacctg
tcacaatttgtaagaaatatttaacaagtctccttgaggtcatctcatcattttatgttg
agtggggaggaaatgcaatgtccttcatgggaaaaggtgttaccaaaagcactgttcttt
gcttacttcacttatctaatgaaatgatggctcaagctaaggatatggactggatatctc
tttggtctttaccttatgacaacagtgaagaacaagttgcttctccactaggtctggcat
ggctggttcctttatgggtagatagagaccctgaggtcagatttacatctcttggaatag
gatcagctcttacatgtcttgaaacaggatgtattgcattagcagaaagttgccagaaca
tttcaggaggcctgtggggaacagtgataaacatccttctggaccaatctgaatgtagca
tggtacgcagggaggctgcttttattctgcaaaatctccttgtgattccaattcctacag
aagatgtgaaagattgtctttggcaagatccttgtgtacatgatgaagaatctggcctct
ctcagacaagaagacctgcactgaagtcgcttttgtatcactgccgattctatgaacatg
tgaatcagatggtaaaacgctgttacttaggatgttatacttttgatttgaattcttcca
aggaagacaacctcatcatagaagaagaaggtataactgataggtcatattttgatgatt
ctcttaacatttggaaggctccatccagtgaaagccgatcttcacattctcaatcaacat
ctgaaactatgattcagtcttcgtcaccatcactggggagtgttactgagcttcaggcag
tagtcccaacagattcagccacttttatacctgaaactgtagttgatcggcttatggccc
aaggtcaaagtgatacaaccacaacagaatctgcaagtcaacatgactctcccatggctg
ctgctctgtctaaacagcgtgctatagttacacctgcacttttgtcagctgtttgcagcc
ttctgcacaatctactgattgttacaccaaaagatactggaactgctcttcaacaagcac
atttgctaacagctctcagcagtcttgtaagtgctaatcgaattgagagatgtatcttgg
aactgaaagctccattgggtcatccctgtcatatagaacatgtaaaaacccaggtattat
tactgcttcaatacttatcatctttgtccaagcttctgaaaacatgtttactggtggatt
ctcagcttgtaatccacgatgaactcttgaaacctctcttgggaaatatcttctcgattc
tcaccatttgcttcaaagatgggttagataccgagttaacatctgtacttcatgaaacat
gggtagactttttcaaccttctagctacattattgtggaagagtggccaaaaatcttttc
catttgtgacagcagcccttgcaaatcattttacaacaattattgatgtcatttgtgatt
gtattaatctgccaactgcatatcctgctttatatatggctagtttgcagttcctctctg
tccttttgaatgaggaaggaagaagacagctccaagataaacaaagtatatgtcagaatc
caactattagctttcttctggaccatgttgaaggatgccagaaatcagcaactcaactta
ctacattaattattcaggtctgggagagaaaatcttcaaaggatgtgctgaaagaaactg
ctacaaatgcactgttgtctctgttagctgtcagtaaaaatgcccagaaatgtgctttgg
aag
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