Colius striatus (speckled mousebird): 104553375
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Entry
104553375 CDS
T08355
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104553375 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csti03000
]
104553375 (CNOT4)
03019 Messenger RNA biogenesis [BR:
csti03019
]
104553375 (CNOT4)
04121 Ubiquitin system [BR:
csti04121
]
104553375 (CNOT4)
Enzymes [BR:
csti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104553375 (CNOT4)
Transcription factors [BR:
csti03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104553375 (CNOT4)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104553375 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104553375 (CNOT4)
Ubiquitin system [BR:
csti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104553375 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104553375
NCBI-ProteinID:
XP_010194297
UniProt:
A0A091JW03
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGTVDKNKNKVTALQRPNSNNKDAWPSLQSSSKSANGLTMEHRKT
PPILENGTDPEHMTPDGADSDFGPIDKPSDSLSIGNGDSSQQITNSDTPSPPPGLTKPNP
VIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSNEWPTAPEPQ
SLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQPSL
SPTSLQNPTPHTTAAKGPGSGFLHPAAPTNANSLGSTFPVMPQRFPQFQQHRAVYNSFSF
PGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIPISDNSSSVESL
NMKEWQDGLRALLPNININFGGLPNASSPSNANHSVPTSNTATTDSLNWDSPGSWMDPAI
ITGIPASTGNSLDTLQDDNPPHWLKSLQALTEVDGPSAAPSQTHHSNPFGTQIPLHRASW
NPYSPPSNPTSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagccctgatgctaaggaagaccctgtggaatgccccctttgcatggaacct
ctggaaattgatgacatcaacttctttccttgcacctgtggctaccaaatctgtcgtttc
tgttggcatcgtatccgcactgatgagaatggactttgtcctgcttgcagaaagccatat
ccagaagatccagcagtgtacaaaccactctcccaagaagagctgcaaaggataaaaaat
gagaagaaacagaaacaaaatgagaggaaacagaagatatcagagaatcgtaaacatttg
gccagtgtacgggttgtacagaagaaccttgtcttcgtggtaggactgtctcagcgccta
gcagatccagaggttttgaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcattaataacagcacatcatatgcaggctcacagggtccaagtgccagtgcatat
gtaacctacatccgatcagaagatgctctgagagccatacagtgtgtcaacaatgtggtg
gtagacggcagaacacttaaggcatcattaggtacaacaaaatattgcagttattttcta
aaaaatatgcagtgtccaaaaccagactgcatgtatctacatgaactaggagatgaagca
gccagtttcacaaaagaagaaatgcaggcgggtaagcatcaggaatatgaacagaaacta
ctgcaagaactatacaaactaaaccccaactttctccagttatctacgggtacagttgac
aaaaacaagaacaaagtgacagcactgcagagacccaacagtaataacaaagatgcctgg
ccatcattacagagttcaagtaaatcagccaacggtttaacaatggaacacaggaaaacg
cctcctatattagaaaatggcacagacccagaacacatgactccagatggtgcagactca
gatttcggccctatcgacaaaccttcagactccctcagtataggaaatggtgacagctcc
cagcagataacaaatagcgacacaccttcaccaccgcctggtttaacaaaacccaatcca
gtcatacccatcagttcatcgaatcacagtgcacggtctccttttgaaggggctgtaaca
gaatcacagtcactcttctctgacaactttcggcaccctaaccctatccctagtgggctt
cctccattccccagctctccacagacttcaaatgagtggcccacagcaccagaaccacag
agcctcttcacatcagaaactataccagtatcctcctccacagactggcaagcggctttt
gggtttggttcctccaaacagcaagaggacgacttagggtttgacccctttgacatcacc
cgcaaagccttagcagacctgattgagaaggaactgtcagtccaagatcaaccttctctc
tcgcccacatctcttcagaaccctaccccacacactacagctgccaaagggccaggctct
ggattcctgcatcctgctgcacccacaaatgccaactctctcggtagcacctttccagtc
atgccacagaggttcccacagtttcaacaacatcgagcagtttacaactccttcagtttt
ccaggccaagcagctcgctatccttggatggccttcccacgcaatagcatcatgcacttg
aaccacacagcaaatcccacctcaaatagtaatttcttggacttgaatctcccaccacaa
cacagcacaggtctgggagggatccctatatcagacaacagcagttctgtagagagttta
aatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaacatcaacttt
ggtggactgcccaatgcttcctccccctccaacgccaaccacagtgtaccaacgtccaac
actgccaccaccgacagcctgaattgggacagccctggcagctggatggaccccgcaatc
atcacaggtatcccagcctccacaggaaacagtttagacacccttcaagatgacaatcct
ccacattggctaaaatctcttcaggctctcacagaggtggacggccccagtgcagcgcca
tcacagacccaccacagtaaccccttcggcacacagatccctctgcacagagccagttgg
aatccctactctcctccttcaaaccccaccagcttccattccccacctccaggctttcag
acagccttcagaccccccagtaaaacccccacagatctactacagagctcagcgctggat
cgtcattag
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