Colius striatus (speckled mousebird): 104553799
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Entry
104553799 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(III) chain-like
KO
K19720
collagen type III alpha
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104553799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csti00536
]
104553799
Glycosaminoglycan binding proteins [BR:
csti00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104553799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
104553799
NCBI-ProteinID:
XP_010194885
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MMSFVQKVTLLILAVFQPSVILAQQDALGGCTHLGQVYADRDVWKPEPCQICVCDSGSVL
CDDIICDDQELDCPNPEIPFGECCPVCPQTTPQPTRVIISRGPKGDPGSPGVPGRNGAPG
PPGQPGSPGAPGPPGICQSCPSINGGSFSPQYDSYDVKAGSAGIGYPQPISGFPGPPGPS
GPPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPVGPPGKDGEPGRPGRNGDR
GIPGLPGHKGHPGMPGMPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGVNGAPGQPGPR
GPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAGSS
GSPGERGEPGPQGHAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGAS
GNPGAKGTPGEPGKNGAKGDPGPKGDRGENGTPGAPGPPGEEGKRGANGEPGQNGVPGTP
GERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPGIP
GSPGSDGKPGPPGNQGESGRSGPPGPPGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGPP
GTPGPAGKNGDVGLPGPPGPTGASGERGEPGPSGPPGLQGLPGGPGPAGENGKPGEPGPK
GEIGGPGFPGPKGENGVPGERGAQGPPGPTGARGGPGPAGSEGAKGPPGPPGAPGGTGLP
GLQGMPGERGASGSPGPKGDKGEPGGKXCIPGARGERGNVGPIGPPGPAGPPGDKGETGP
AGAPGPVGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEAGPPGAAGP
QGGPGAPGPPGPQGIKGERGSPGGPGAAGFPGARGLPGPPGNNGSPGPPGNAGPAGKDGP
PGPPGSAGSPGGPGPAGIRGEPGSPGEKGPPGARGERGAPGEPGPQGIVGGRGNTGLPGL
RGPSGPPGIAGAKGEDGKPGSNGVPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDGSPGR
DGSPGGKGDRGESGSPGPPGPPGHPGPAGNNGAPGKAGERGFQGPPGPPGSTGPAGARGP
AGPQGPRGDKGETGERGSNGIKGHRGFPGTPGLPGPPGPLGPQGAIGSPGASGARGPPGP
SGPPGKDGTSGYPGPIGPPGPRGNRGESGPAGPPGQPGPPGPSGPPGPCCGGGAAALGAG
EKGPVGYGYEYRDEPKENDISLGDIVSSMKAINNQIENIISPDGSRKNPARNCRDLKFCH
PELKSGEYWIDPNQGCKMDAIKVYCNMETGETCLSANPSSIPRKNWWSSESSGRKHVWFG
ESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYLDQANGNVKKA
LKLMSSVESEIKAEGNSKFTYAVLEDGCTEHTGEWGKTVFEYRTRKTMRLPVVDIAPIDV
GGPDQEFGVDIGPVCFL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt
attttggcacaacaagacgccctaggaggttgtacccatcttggacaggtttatgctgac
agggatgtctggaaaccagagccatgccaaatctgtgtgtgtgactcaggatctgttctc
tgtgatgacattatctgtgacgatcaagagctggactgtcccaatccagagattcccttt
ggagaatgctgtccagtttgtccacaaacaacaccacagcctacaagagtaataatcagt
cgaggacccaaaggagatcctggttcccccggggttccaggcagaaatggtgcccctggc
cctccaggacagccaggcagtcctggagctcctggcccacctgggatctgccagtcatgt
cccagtataaatggaggcagtttttctccacagtatgactcctatgatgtgaaggctggt
tcggctggtattggttacccacagcccattagtggctttccaggacctccgggacccagt
ggcccccctggcccacctggccatgctggtccccctggctctgctggataccaaggttcc
cccggagaaccaggacaacctggccctcctggacctccaggccctgttggaatgattggc
ccagttggcccaccaggaaaagatggagaaccaggaagacctggcagaaatggagaccgt
ggaatccctggattacctggtcacaagggacaccctggaatgcctgggatgcctgggatg
aaaggtcaacgaggttttgatggaaaagatggtgcaaaaggtgacagcggtgctcctggt
ccaaagggtgaaactggtcttcctggagtgaatggagcaccaggccaaccgggaccaaga
ggtccagctggtgaaagaggaagacctgggaaccctggtggccctggtgcccatggcaaa
gatggttctccaggagcagcaggcccacctggtcccccaggcccccctggaactgcagga
tttccaggctctccaggttttaagggtgaagctggtcctcctggtcctgctggttctagt
ggtagtcctggagagagaggagaacctggtcctcagggtcatgctgggccacctgggcct
cagggtcctcctggaagagctggaagccctggcaacaagggtgaaatgggaccttctggt
attcccggagctcctggtctgccaggaggccgtggtcttcctggtcctccaggtgcaagt
ggaaaccctggagcaaaaggcactccgggcgaacctggtaagaatggtgcaaaaggagat
ccaggcccaaaaggcgaccgtggtgaaaatggcacacctggtgctcctggacctcctggt
gaggaaggcaaaagaggtgcaaatggtgaacccggccagaatggcgttcctggtacacct
ggagaaaggggctcccctggtttccgtggcttacctggtagcaatggactcccaggtgaa
aagggtcctgcaggagaacgtggtagcccaggtcctcctggccccagtggacccgcagga
gagcgtggacaagatggaggcccaggtcttcctggaatgagaggtttgcctggaattcca
ggaagccctggaagcgatgggaaacctggccctccaggtaaccagggtgaatctggccgc
tctggtccacctggccctccaggcccacggggtcaaccaggtgtaatgggtttccctggt
cctaagggcaatgagggtgcaccaggcaagaatggagaaagaggccctggtggaccacct
ggaacacctggtcctgctgggaagaatggtgatgttggtctcccaggtcctcctggacct
actggtgcttctggggagagaggagaaccaggcccatcaggtccacctggcctccaggga
ttgcctggtggaccaggaccagctggagagaacggaaagcctggagaaccagggccaaaa
ggtgagattggaggacccggattcccaggccctaagggtgaaaatggtgtcccaggtgaa
cgtggtgcacaaggtcctccaggaccaactggagcaagaggtgggccaggtcctgctggc
tcagaaggtgccaagggtcctcctggaccccctggtgctcctggaggcacaggactgccg
ggattacagggaatgccaggagaaagaggagcttctggaagtcctggaccaaaaggagat
aagggagaacctggtggcaaanngtgcattcctggtgcaagaggagagcgaggtaatgta
ggtcccatcggtcctcctggtcctgccggcccacccggagataagggagagactggtcca
gcaggtgccccaggtccagtgggttcccgtggtggtcctggtgaacgaggagaacaaggt
cttcctgggcctgctggcttccctggagctccaggccaaaatggagaacctggtgggaaa
ggagaaagaggcccacctggtctaagaggagaggctgggccccctggagctgcaggtcca
caaggaggtcctggtgcaccaggtccacctggtccccaaggaataaaaggagaacgcgga
tctcctggaggtcctggtgctgctggcttccctggtgctcgtggtctacctggtcccccc
ggtaacaatggtagtccaggtcccccaggaaacgcagggcctgcaggcaaagatgggcct
cctggaccacctggtagtgctggttctcctggcggtccaggacctgctggaataagaggc
gagcccggctcaccaggcgaaaagggaccaccaggagcacgaggagaaaggggggcacca
ggtgaaccaggacctcaaggcattgttggtggccgaggtaacacaggattgccaggtctg
cgtggcccaagcggtccacccggtatagcaggtgccaagggtgaagatggcaaaccaggc
agcaatggtgtcccaggagaacgcggtgctcctggtccacagggtcctatcggacaaaga
ggcttacctggggaacctggcagagatggtaaccctggctcagatggctcgcctggacgt
gatggatccccaggaggcaaaggtgaccgtggtgaaagtggctctcctggccctccggga
cctcctggtcaccctggacctgcaggtaacaatggtgcacctggaaaagctggtgaaaga
ggatttcagggtccacctggccctcctggctctactggtcctgctggtgctcgtggtcct
gctggtcctcaaggtcctcgtggtgataaaggtgaaactggtgaacgaggcagcaatggt
ataaagggtcatagaggatttcctggtacccctggtctccccggtcctcctggtcccctg
ggtccacaaggtgcaattggaagtccaggagcttcaggtgcaaggggtcccccaggacct
tctgggccacctggaaaagacggtacaagtggctatccaggtccaattggccctcctggc
ccccgcggtaacagaggcgaaagtggtcctgcaggtccaccaggccagcctggtcctcct
ggtccttctggtccacctggtccatgttgtggtggtggtgcagctgccctgggtgctggt
gaaaaaggtcctgtgggctacgggtatgaatatcgagatgagccaaaagaaaatgatatc
agtctgggcgacatcgtgtcttcaatgaaagcaattaacaaccagattgaaaacatcatt
agtcccgatggctcacggaagaacccagctcgtaactgcagagatctgaaattctgccat
cctgagctcaagagtggagagtactggattgatcctaaccagggctgtaagatggatgcc
attaaagtatactgcaacatggaaacgggtgagacgtgtctcagtgctaaccccagcagc
ataccaaggaagaactggtggagcagcgagagcagtggaaggaaacatgtttggtttggg
gaatctatgaatggaggcttccagttcagctatggagatcctgagcttccagaagacgtc
tcagaagttcagctggccttcctccgcatcctctcaagccgtgcctcccagaacatcacc
taccactgcaagaacagcattgcctatttagatcaagccaatggaaatgttaaaaaagct
ctgaaactgatgagctctgtggaaagtgaaatcaaagccgaaggaaacagcaaattcaca
tatgctgttctggaagatggctgtactgaacacactggcgaatggggtaaaacagtcttt
gaatacagaacacgtaagacaatgaggttgcccgtggttgatatcgcccccatagatgtt
ggtggtcccgatcaggagtttggcgtggacattggcccagtctgcttcttataa
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integrated database retrieval system
