Colius striatus (speckled mousebird): 104554284
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Entry
104554284 CDS
T08355
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104554284 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csti03000
]
104554284 (ARID1B)
03021 Transcription machinery [BR:
csti03021
]
104554284 (ARID1B)
03036 Chromosome and associated proteins [BR:
csti03036
]
104554284 (ARID1B)
Transcription factors [BR:
csti03000
]
Eukaryotic type
Helix-turn-helix
ARID
104554284 (ARID1B)
Transcription machinery [BR:
csti03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104554284 (ARID1B)
Chromosome and associated proteins [BR:
csti03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104554284 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104554284
NCBI-ProteinID:
XP_010195550
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
NYSRPPTYSGVPNTSYSGPGPGMGINTNSQMHGQGPNQPCGTMPLGRMPSAGMQSRPFPG
NMSSMTPNSPGMSQQGGPGMGPPMPSVNRKAQEAAAAVMQAAANSAQSRQGNFPAMNQSG
IMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKAD
GKEEGPPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGW
PKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLTFMEERGTPVASLPAVGKKPL
DLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKIER
GEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPAST
PHGQMTPMQGGRNSTVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPN
KDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFPYGSGYDRR
HEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGN
QQQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSSS
EGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVN
QRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLP
SMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEA
WRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFG
ILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDECTDYFDEDEEEGEDEKVEGEE
KSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGHVQEFDSGLLHWQ
LGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDDV
LSARPGALPEDSNSGSQPESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDS
LAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEE
EDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPS
AEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVG
DRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLM
HMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVIC
DVLFQIGQL
NT seq
4352 nt
NT seq
+upstream
nt +downstream
nt
gaaactactccagaccaccaacatacagcggtgtacccaacacaagttacagtggcccgg
gacctggcatgggcataaacaccaacagtcagatgcatggacaggggccaaaccagcctt
gtggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccatttcctg
gaaacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggccccggga
tgggcccacccatgccaagtgtgaaccgtaaggcacaggaggcggctgctgcagtgatgc
aagctgctgcaaactccgctcagagcaggcaaggcaattttcctgccatgaatcagagtg
gtatcatgggatccagctccccctacactcagccgatgaacaacagctctggcttgatga
acccgcaggctcctccttacagcatggcacctaacatggtgaacagttcaacagcaccta
tgggtcttgcagatatgatgacacccggtgagtccaaactaccccttcctctcaaagcag
atggcaaagaagaaggacccccgcaacccgagagcaagtcaaaggatagctacagctctc
agggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaa
gctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggct
ggccaaagactccatcaagccctaaatcaagttcctctaccacaactggagagaagatca
ctaaagtctatgagctaggaaacgagccggagcgcaagatgtgggtagatcggtacctca
cgttcatggaggagagaggcacccctgtggccagtttgccagctgtgggcaagaagcccc
tggacctgttcaggctctacgtctgcgtcaaagagattggaggtttagcacaggttaata
aaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcaagcagcgcag
ctagctccctgaaaaaacaatacattcagtacctttttgccttcgagtgcaagatcgagc
gaggggaggagccccctccagaagtcttcagcactggagatactaagaaacaacctaaga
ttcagccgccatctcctgctaattctggttccttgcaaggcccacagactccacaatcaa
ctggtagtaattccatgacagaagtaccaggagatttgaagcccccaacaccagcatcaa
cacctcacggacagatgacacctatgcagggtggcagaaacagcacagttagtgtgcatg
atcccttttctgatgtaagtgattcagcattcccaaagcgaaactccatgacgccaaatg
caccataccagcagggaataaacatgccagatatgatgggaaggatgccatatgagccga
ataaagatccttttggtggaatgagaaaagtgcctggaagcaatgagcctttcatgaccc
ctggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctggagcaa
tgtccaacatgagcatgagccagagacagcagttcccttatggaagtggctatgacagga
ggcatgaaccgtatgggcaacagtatccaggacagggacctccctcaggacagccaccat
atggaggacatcaacctggaatgtatccacagcagcagaactacaagcgacatatggatg
gcatgtatgggcctccagccaagcgccatgaaggggatatgtataacatgcagtatggca
accagcagcaggaaatgtataaccagtacagcaacgcttacacggggcctgacaggaggc
ccatgcagggacagtatccatatccatacaacagggagaggatgcagggcccaggacaaa
tgcagcagcatggaatacctccccagatgattggtggccccatgcagtcgtcatcctcca
gcgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttaccaga
ataggcaaggtccaggaggccctgcacaggccccaccgtatccagggatgaatcgcactg
atgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcatgtca
accaacgtcagccttcttatatgtcatcctcagcctccatgcagcctatcactagacctc
ctcagtcatcctaccagacgccaccctctatgccaaaccacatctctagagctccaagtc
cagcatccttccagcgttctttggaaaaccgtatgtctccaagcaagtctcctttcctac
cttccatgaagatgcaaaaggttatacccacagttccagtgtcacaggtcacaggacctc
caccccaaccaccaccaattaggcgagaaattaccttccccccaggctctgtagaagcat
cccaaccagtcttaaaaccaaggcgaaagattacctcaaaagatattgtaactcctgagg
cctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcgctag
acactattaatattcttctgtatgatgacagcactgttgctactttcaacctctctcagt
tgtctggatttcttgagcttttagtagaatattttagaaaatgcctaattgacatttttg
ggatccttatggaatatgaagtgggagatccaggccacaaagcacttgatcacaaagcag
ccaagaaagatgacagccagtccttggccgaggatactggaaaagaggagaacgacgaat
gtactgactattttgatgaagacgaggaggagggggaggatgaaaaagtagaaggagaag
aaaagagcattgttttttccactcctggtgccattgctgatccaagtgagaggccaaaac
aagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctctttgtcg
ttgaccgatctgacaaacttggacacgttcaggaatttgatagtggacttctccactggc
agcttggtggtggtgacacaactgagcacatccagactcactttgaaagcaagatggaga
ttcctccgcgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggacctcg
aggggaaaggcgaatctgaggaacaacaagaaaaaagtataacagcgaccattgatgatg
tcctctcagctcgaccaggagcgttgcctgaagactcaaactctggctcccaaccggaga
gcagtaaatttccgtttgggatccatcaagccaaaagccaccggaatattaaactgctag
aggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaagact
ccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcctg
gcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagctgatcc
ttcttcaccatgagcatccagaaagaaaacgagcgccacagacttacgagaaagaggaag
aggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtct
tgagggataatacattggtcacattagccaacatttctgggcagctagacttgtctgctt
acacggaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgcccgt
ctgcggaggcacaggatccttttccaaccgtggggcccaactcggttctttcgcctcaga
gacttgtgctggagaccctgtgtaagctcagcatccaggacaataatgtggaccttatct
tggccacccccccattcagtcgtcaggagaaactctacgctactttagttaggtacgtcg
gggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcctatcgaaccttgccc
agggggacacgttagcagcaagggcaatagctgtgcagaagggaagcatcggaaacttga
taagcttcctggaggatggggtcactatggcccagtaccagcagagccagcataacctca
tgcacatgcagcctccgcccctggagccgcccagcgtagacatgatgtgcagggcggcca
aggccttgctggccatggcgagagtggacgagaaccgctccgagttccttttgcacgagg
gtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatct
gtgatgtactttttcagatcgggcagttatga
DBGET
integrated database retrieval system
