Colius striatus (speckled mousebird): 104554333
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Entry
104554333 CDS
T08355
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti02010
ABC transporters
csti04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104554333 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104554333 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csti02000
]
104554333 (ABCA1)
Transporters [BR:
csti02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104554333 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104554333
NCBI-ProteinID:
XP_010195628
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
SQVIVSGYRIQLQDLCNSSTLSKFLTIKNWMVAMDTEAFLCTLPKKRLHTVGQAFHANLN
PLKPLQGRLSLNTSLQDLSETVEALRESLGKLVKELLSMNSWSDMRQEVKFLTNVNASSS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWKALKPLLIGKILYTPDTPAIRKVMTEVNRTFQDLGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKSNALWDLHLPASNWTVEDVARFLSNSPEDLETANS
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEIRLINKSLELLDERRFWAGIVFT
EVAPNSVELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDV
VEQAIIRVQTGTEKKMGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKILA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEKPQDRQHSHPDQKGPSEVCKEEEPMHLSLGV
SIQNLVKVYRDGKKIAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLSENKVKEEMEQMAVDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLMIDVSAISNLITKHVSEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDVLSGMDGKGSYQMK
GWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPEDAGTQVLLDALLNKPGFGTRCMQGYSILDTPCTVGQMEWTTTS
VPDSVQEIMLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKK
ILELAQGSSGDRFLNSLSNFMEGLDTKNNVKVWFNNKGWHAIASFLNVMNNAILRANLQQ
GKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLAL
LLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNNLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIKPRPVYAKLPPLNDEDEDVTRERQRITSGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGYSILSN
IQEVHQNMGYCPQFDAINELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
tcccaggtcattgtgtctggttatcgaatccaattgcaagatctctgcaatagctccaca
ctgtctaaatttctcacaatcaaaaattggatggttgctatggacactgaagccttcctt
tgcaccttgccaaagaaaagactccacacagtaggccaagcattccatgctaacctgaat
cctttgaagcctcttcagggtcgactttctttaaatacctccttgcaggatctgtcagaa
actgtggaagctttgagagagagccttgggaagcttgttaaagagttgctgagcatgaac
agctggagtgacatgagacaagaggtgaaattcctgacaaatgtgaatgcctccagctcc
tctacacagatctaccaggctgtgtcacgcattgtgtgtggccatcccgaaggtggaggg
ctcaaaattaaatctcttaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtaactaacttctatgataactccacaacaccctactgcaat
gagctgatgaagaacctggaatccagcccgctttccaggattatctggaaggctttgaaa
cctttgctgattgggaagatcttgtacactccagacacgccagccataaggaaggtcatg
actgaggtgaacaggacgttccaggacctgggtgtgtttcgtgacctcggggggatgtgg
gaggagataagcccaaagatttggacgtttatggaaagcagtcaggaaatggatctcatt
cggactctgctgaaaagcaatgctctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgctcgtttcctgtcaaacagtccggaggatttagagacagcaaacagc
tcagtgtatacctgggtggatgccttcaatgagacagacagggctatccagaccatttcc
cgcttcatggagtgtgttaacttggacaaactggaacctgtggccacagagatccggctt
ataaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaagtagctccgaacagtgtagagctccctcaacacgtgaaatacaagatacggatggac
attgataatgtggaaaggaccaacaagatcaaggatggatactgggatcctggtccccgt
gctgacccctttgaggacatgcgttatgtctggggaggcttcacctacctgcaagatgtg
gtggaacaggccatcatcagggtgcagactggcacagagaagaagatgggagtttatgtg
cagcagatgccctacccatgttatgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgactctagcctggatctactcagtggccgtgataattaagggcatt
gtgtatgagaaggaagcccgtctgaaggagactatgaggattatggggcttgacaatggc
atcctttggctaagctggttcattagcagcctcatccctctcctgatgagtgcaggcctg
ctggtgctgatccttaagatggggaatctgctgccttacagtgaccctagtgtggtgttt
gttttcctctcaatctttggtgttgtgaccatccttcagtgcttcctcatcagcaccgtg
ttctccagggctaacctggcagctgcctgtgggggcattgtctatttcacactgtatctg
ccttatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatccttgcg
agcttactgtctccagtagcctttggctttggttgtgagtactttgcgctgtttgaggag
cagggagttggtgttcagtgggacaacttctttgaaagcccattagaagaagatggcttt
agcatcaccacatctgctgttatgatgttgtttgacaccttcctatatggggtcatgacc
tggtacatcgagtccgttttcccaggccagtatgggattcccaggccgtggtactttcct
ttcacaaagtcctattggtttggcgagaaaccacaggacaggcagcactctcatcctgac
cagaaggggccttcagaagtctgcaaggaggaagagcctatgcatctgagccttggtgtt
tccatacagaacttggtcaaggtttatcgtgatggcaagaaaattgctgtagatggactt
acactgaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
actactactatgtctatcttgacgggcctgttccccccaacctcgggtacagccttcatc
ctgggcaaagatatccgctctgagctcagcactattaggcagaacctaggtgtctgtcca
caacacaatgtgctgtttgacttgttgactgtcgaggagcacatctggttctatgctcgt
ctcaaagggctatcagaaaacaaagtgaaagaggagatggagcagatggcagtggatgtt
ggtttgcctcacaaactgaaagccaggacaagcaaactctctggtggcatgcagaggaag
ctctcagttgctttagcctttgttggtggctctaaagttgtcattctggatgagccgaca
gctggagtggatccttattctcgcagagggatttgggaattgctcctgaagtatcggcaa
ggtcgcactatcattctctccacccaccacatggatgaggcagacattctgggggaccgg
attgccatcatctcccatggcaagctctgctgtgttggctcttctctcttcttgaagaac
caactgggaacaggctattatctgaccctggtcaagaaggatgtggattcctctttgagt
tcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccag
agcagctctgacgctggccttggcagtgaccatgaaagtgacacactgatgatagatgtc
tctgcaatttcaaatctcattacaaaacatgtttcagaggccagactagtggaggacatt
ggccatgaattaacctatgtcttgccatacaaggctgctaaagagggagctttcgtagag
ctgttccatgagattgatgaccgtctctctgatcttggcatttccagctatggcatctct
gaaaccacactggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatgggacattgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcgtttgatcctaatgattcagacatagatcca
gaatccagagagacagacgttctcagtggcatggatgggaaaggctcctaccagatgaag
ggctggaagctcacccagcagcagttcatggctctgttgtggaagagactgcttattgcc
aagagaagtcggaagggtttctttgctcagattgtgctaccagctgtttttgtatgtatt
gctctcatgttcagcttgattgttcctccctttgggaagtatcccagcctggagttacag
ccctggatgtatgatgagcagtacactttcatcagcaatgatgctccagaagatgcaggc
actcaggtgcttttggatgcccttctcaataagcctggttttgggacacgctgtatgcag
ggatactccatcctagacactccttgcactgtggggcagatggaatggaccaccacatca
gtcccagactcagtccaggaaatcatgttgaaaggcaactggagcatggagaacccttcc
ccatcttgcgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgcccccctggt
gcaggtgggctgccacccccacagcgtgagcaagacactgctgatattctccagaacctg
acaggacgcaatatatcagactatttagtgaagacatacgcgcagatcattgggaaaagc
ttgaagaataagatctgggtgaatgagttcaggtatggcggcttttccttaggagctagc
agttccctcatgcttcctccaagccatgaagtcaccgatgccattaaacaggtgaagaaa
atcttggagctagcacagggcagttctggagatcggtttctcaacagcttgtcaaatttc
atggaaggcctggatacaaagaacaatgtaaaggtgtggttcaacaacaagggctggcat
gccatcgcctccttcctgaatgtgatgaacaatgccatccttcgggccaacctgcagcag
ggcaaaaaccccagtgcttacgggatcactgccttcaatcaccctctcaacctcaccaag
caacagctctctgaagtcgctctgatgaccacctctgtggatgtcctagtctccatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggtcttccttatccaggaacgt
gtcagcaaggctaagcacttgcagttcatcagtggtgtgaagcctgtgatctactggctg
gccaactttgtctgggatatgtgcaactacattgttccagccacattagtcatcatcatc
ttcatctgcttccagcaaaagtcctatgtatcatcatccaacttgcccgtactggctctc
cttctgtttctctatgggtggtccatcacccctctcatgtatccagcttccttcgtgttc
aaaatccccagtacagcatatgtcgtgctaaccagcgtgaacctctttattggcatcaat
ggtagtgtggccacttttgtcctggagctcttcaccaacaataatctgaacaacattaat
gatatcctgaagtctgtcttcctcatcttcccccacttctgcttggggcggggactcatt
gacatggtcaaaaaccaagccatggccgatgctctggagaggtttggagagaatcgtttt
gtgtcccctctgtcatgggacctggtgggaaggaatctttttgccatggcagtagagggt
gttgtcttctttctcatcacagtgctcatccagtacagattcttcatcaaacctaggcct
gtttacgccaagctgcctcctctgaatgatgaagatgaggatgtaaccagagagagacag
aggataactagtggagggggacagagtgacatcttggaaatcaaggagctaaccaagatt
tacagaatgaagcggaagccagcagttgataggatctgtgttggaattccccctggagag
tgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgctaact
ggtgatacagatgtgacaggaggagaagctttcctcaaaggatacagtatcttgtccaac
atccaagaagtccatcagaacatgggctactgcccacagtttgatgctattaatgagctg
ctgacagggagagagcacttggagttctttgcgcttctgagaggtgttccagagaaggaa
gtctgcaaggttggcgagtgggcaattcggaaactgggcctcgtgaaatatggagaaaaa
tatgctgggaactacagtggagggaacaggcgcaagctctccacagccatcgccctcatc
ggagggccacctgtggtgtttctggatgaaccaacaacagggatggatcctaaagcacgt
cgcttcctgtggaactgtgccctgagtgtaatcaaagagggcagatcagtggtgctgaca
tctcacagcatggaggagtgcgaggctctgtgcacccgaatggcgatcatggtcaacggg
cgattcaggtgtctgggcagcgtccagcatctcaagaacaggtttggagatggctacacc
atagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttctttggg
catgccttccctggaagtgtcctgaaggaaaagcatcggaacatgctgcagtaccagctt
ccttcttcaccatcctccctggccagaatatttagtattctctcccagaacaagaagaga
ctccatatagaagactactccgtttctcagactacacttgaccaagtatttgtaaacttc
gctaaggaccaaagcgacgatgaccacactaaggacctgtcattgcacaaaaaccagact
gtggtagacattgcaattcttaattccttcctgcaagatgagaaggtaaaagaaagttgt
gtgtga
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integrated database retrieval system
