Colius striatus (speckled mousebird): 104554523
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Entry
104554523 CDS
T08355
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csti04131
]
104554523 (LRBA)
Membrane trafficking [BR:
csti04131
]
Endosome - Lysosome transport
Others
Others
104554523 (LRBA)
Endosome - Golgi transport
104554523 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104554523 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Laminin_G_3
Neurobeachin
Motif
Other DBs
NCBI-GeneID:
104554523
NCBI-ProteinID:
XP_010195900
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MNFIIQEGEGITCMVDLLDKCDVTCQAEVWSMFTAILKKSIRNLQACTEVGLVEQVLKRI
SRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEKGRWPPHAGKLLSMLKHMPQKY
GPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFRTNK
GLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVTIVHIYNRWKNSELRCYVN
GELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMTSVYLFSEALNAAQIFAIYQ
LGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAFMYNPRATDAQLCLESSPKDNPS
IFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPLFAQLDYRQYSSDHVDTTVCSTL
LAFIMELLKNSIAMQEQMLSCKGFLVIGHSLEKSSKAHVTRAVLELCLAFSKYLSNLHNG
VPLLKQLCDHILLNPAIWIHIPAQVQLTLYTYLSTEFIGTVNIYGAIRRVGTVLLVMHTL
KYYYWVVNPQDRSGITPKGIDGPRPTQREILSLRAFLLMFVKQLVMKDCGIKEDELQSIL
NYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNGLQVVYKLLASQSEGIRVQALK
VMGYFLKHLAPKRKAEVMLGHGLFSLLTERLMLQTSLITMTTYNVLFEILTEQICTQVIH
KQHPDTDSSVKIQNPQILKVIAILLRNSPQCPETLEVRRAFLSDMIKLFNNSRENRRSLL
QCSVWQEWMLSLCCFNPKTSEEHKITEMVYTVFRILLYHAIKYEWGGWRVWVDTLSITHS
KVTFEMHKESLSQMYKEYQGKGDERRIRTISGVSKEAETEGKQQCLELKENATDPSCIMH
CDVERSTEKEETNTSSDGDQQTPSVSNHREELEGEDREITQDLKAMPCEEFSSETDTIKP
SVSEITTGIAEAIEDSLSKADEVVEETVAVTAASVAKPTTLEEETPKSPERLEKSTVEME
DEDDFVDLKEESSMPLPSEESAEMSKECSSNESKVTRQEKAIEKNPESVLLKSEDTGGAD
EKNQELALQEAASSVVQEAVTQPDSEGKKKLEEKKIIFRETKRTEESANAHVPEHAVPLD
KRIAKLDVSSVASDTERLELKANTCLEAPLHPRSMPETSRQQDSSGQELAASATSDGQRR
DSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNT
IHLISQVLDNMIMACGGILPLLSAATSATHELESIEATQGLSVEASLTYLQRLINLVDVL
IFASSLGFTEIESEKNMSSGGILRQCLRLVCAVAVRNCLECQQHAQMKPTGDTVKNQKPV
QGFIGTGKSAAKSPVDIVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDSKQAQFLALA
VVYFISVLMVSKYRDILEPQNERRPSNHSQSFQESENESKATPATDVENPSAVLAALAST
EDSESTASVQRRDSGLGEEPASGQTNSSGSVAEAGPLNVSAGPDAISEVLCTLSLEVNKS
QEGKSETGTEDIKPAASVTAAKNVNVKDILRSLVSTPADGTAVDAALLPPTFLGVLGNGA
AEQAVQFHSFDRSVVVPQKKSTVSSSTAAMGIPTNAVSVVSSLDSAQALDLSGDSPGRGS
SSSKLPSVPTVSSVPADSASNMSITDRLEHALEKAAPLLREIFVDFASFLSRTLLGSHGQ
ELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGR
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatcatccaagaaggagagggcatcacctgcatggtagacttgctggacaag
tgtgatgttacctgccaggctgaggtgtggagcatgtttacagcaatcttgaaaaagagt
atacgcaatctacaagcatgtacggaagtggggctcgttgaacaagtgctcaagaggatt
agtagagctgacaacatgattgcagatcttttagtggatatgctgggtgtgttggctagc
tataacttgacggttcgagagctaaagttattcttcagcaagcttcaaggagaaaaaggg
agatggccaccacatgctgggaagttattgtctatgttaaaacacatgcctcagaagtat
ggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgccttacctcct
atagccaagtggccataccagaatggatttacttttcacacttggctaagaatggatcct
gtaaataatatcaatgtggataaggataagccttatttatattgttttcgaacaaacaaa
ggactgggttattctgctcactttgttggaggctgcttgattgtaacgtccataaaatca
aagggcaaaggtttccagcattgtgtgaaatttgatttcaaaccgcaaaagtggtatatg
gttactatagtgcacatctataaccgctggaagaatagtgagcttcgatgttatgtgaat
ggggaactggcatcttatggagaaataacatggtttgtcaacaccagtgatacatttgac
aaatgtttcctgggttcttcagaaacagcagatgccaatcgagtgttttgtgggcaaatg
acatccgtttacctttttagtgaggctctcaatgctgctcagatatttgccatttatcag
cttggtctgggatataagggaacattcaaattcaaggcagaaagtgatctcttccttgat
gaacatcacaaattgttactatatgatggcaaactatccagtgctattgcttttatgtac
aatccaagggctacagatgcacagctgtgtctagagtcatcccctaaggataacccttct
atttttgttcactcaccacatgccctcatgctgcaggatgtgaaagcagtcttaacgcat
tctatccaaagtgccctgcactccattggaggagtgcaggtacttttccctctctttgca
cagctagactataggcaatattcatcagaccacgttgacacaactgtttgttctacttta
ttggcattcatcatggagttgttgaagaactccattgctatgcaagaacagatgctttcc
tgtaagggcttccttgtgataggacatagcctagaaaagtcttccaaagcccatgttacc
cgagctgtactagaactttgccttgccttttcaaagtacctgagcaacttgcacaatggg
gtgcccttgctgaagcagctgtgtgatcatattctccttaatcctgcaatatggattcat
atcccagcacaggttcagctgaccctgtacacttacttgtctactgagttcattggcact
gttaacatatatggtgcaatccgacgagttgggacagtccttttggtcatgcatacccta
aagtattattactgggtagtgaatcctcaggatcgcagtggtataactcccaaaggcata
gatggaccacgacctactcaaagagagattttatctctgcgagctttcttgttgatgttt
gttaaacagctagtgatgaaggactgtggaataaaagaagatgaattgcagtctatcctc
aattatctactcactatacatgaggacgacaatctaatggatgtcttgcagttgcttgtt
gctctgatgtcagagcatcccagttctatgatccctgcttttgatcagaggaatggatta
caggtcgtctacaagcttttagcatcacaaagtgaaggcatcagagtgcaagctctaaaa
gtgatgggatatttcttaaagcatctcgctccaaagagaaaagctgaagtcatgcttgga
catggattgttctctttgttgactgaaaggctgatgcttcagacaagcttaatcaccatg
accacatacaatgtcctatttgagattctgactgaacagatttgcactcaagtgatacat
aaacaacatcctgacacagattcatcagtgaagatacaaaatcctcagattttgaaggtt
attgcaatcctgctacgtaattctccacagtgtccagaaactctggaggttcgtcgagcc
tttctctcagatatgattaaacttttcaataacagcagagaaaataggaggagtttgttg
cagtgctctgtctggcaggagtggatgctttccctttgctgttttaatccaaagacttct
gaggaacacaagataaccgagatggtgtatactgtatttcgaattttgctttaccatgca
atcaaatatgagtggggtggctggcgtgtttgggtggatacactgtcaatcacacattca
aaggtaacttttgaaatgcacaaagagagtctctctcaaatgtacaaggagtaccaaggg
aaaggagatgaaaggagaattagaacaatctctggagttagcaaagaagctgaaaccgag
ggaaaacaacaatgtttggagttaaaagaaaatgctactgatccttcctgcattatgcac
tgtgatgtggagcgtagtactgaaaaagaagagacaaatacctcatcagatggtgaccaa
caaactccgtcagtatctaatcatagggaggagttagagggggaagacagggagattaca
caggatttaaaagcaatgccttgtgaggaattttcttcagaaacagatacaataaaaccc
agcgtttcggaaattactactggaatagctgaagcaattgaagattctctgagtaaagct
gatgaggttgtagaggaaacagtagctgtcactgctgcttctgtagcaaagccaactact
ttggaagaagaaactcctaaaagtccggaaagactggaaaaatcaacagtagagatggaa
gatgaagatgactttgttgacttgaaagaggaaagtagtatgcctttaccttcagaagag
tctgcagaaatgagcaaggaatgtagctctaatgaaagcaaagtgacaaggcaggaaaaa
gcaatagagaagaatcctgagtctgtgcttttaaaatctgaagatacaggaggtgcagat
gagaaaaaccaagaactagctttacaggaagcagcgagttctgtggttcaagaagcagtg
actcaaccagattcagaaggcaaaaagaagctggaggaaaaaaagattatttttcgtgaa
acaaaaagaactgaagaaagtgcaaacgcacatgtaccagagcatgctgtaccccttgac
aaaagaattgccaagcttgatgtttctagtgttgcatcagatacagaaagactggaactg
aaagctaacacatgtctagaagcacctctgcaccccagatccatgcctgagacctcaaga
cagcaagattcttcaggacaagaactagctgcatcagctacatcagacgggcagagaaga
gactctaggtcaactgtgtttcgtattcctgagtttaaatggtcactgatgcatcaacgc
ttgctcacagacttactcttttccatagaaacagatatacagatgtggagaagccattct
acaaaaactgtgatggactttgtgaatagcagtgacaatgtcatatttgtgcacaacaca
attcacctcatctctcaagtgttggacaacatgatcatggcttgtggtggtatattgcca
ttgctttctgctgccacgtctgctacgcatgaattggagagtattgaggcaactcaagga
ctttcagtagaagcgtctttaacatatctccagagattaatcaaccttgtggatgtgcta
atttttgcaagctctcttggtttcactgaaattgagtctgagaaaaatatgtcatctgga
ggaattctacgacaatgtcttcgtctggtatgtgcagtagcagtaagaaattgcttggag
tgtcagcagcatgcacaaatgaagcctactggagacactgtgaagaaccaaaaaccagta
cagggctttataggaacagggaagtctgcagcaaagagtccagtggacattgtgactggc
ggcatttctccaattcgagaccatgacaggcttctgcaggatatggatattaatcgactt
cgagcagtagtgttcagagatatagaggatagtaaacaggctcagtttttggctttggct
gttgtatactttatttctgtgctcatggtttctaaatacagagatatactggaaccccag
aatgaaagacgaccatcaaaccatagccagtcatttcaggaatcagagaatgaaagtaaa
gcaactcctgctacagatgtggaaaacccgtctgctgtgcttgctgctttagcctctacg
gaagattcagaaagcacagcatctgtgcaaagaagggattctggtcttggagaagaacca
gcttcagggcaaacaaatagttctggtagtgttgccgaagcagggcctctgaatgtcagt
gcaggtccagatgcaatcagtgaagtactatgcacgctctcattagaggtaaataagtct
caggagggcaaaagtgagacaggaacagaagatattaaacctgcagcttctgtaacagct
gcaaaaaatgtcaatgtaaaggatatcttgagaagcttggtaagcacaccagctgatggg
actgcagtggatgctgctcttctgccaccgaccttccttggagttcttggcaatggagct
gctgagcaggctgtacagttccattcttttgacaggagtgtcgtggtaccacagaagaaa
tcaaccgtttcctcttctacagctgctatgggtattcctacgaatgctgtcagtgtggtt
tcttctttagattcagcccaagccctggatttgtcaggagactctcctggaaggggatca
tctagttcaaaattgccatctgtccctacagtttcttcagtgcctgcagattcggcttca
aatatgagtattacagacaggcttgaacatgctttggaaaaagctgccccacttctgaga
gagatttttgtggatttcgcttcctttctttctcggactcttttgggcagccatgggcag
gagttgctcatagaaggtacaagtcttgtgtgcatgaaatctagcagttcagttgtggag
ctggtgatgctgctttgctctcaggagtggcagaactctatacaaaagaatgctggcctt
gcctttattgagcttgtcaatgaaggaaggtaa
DBGET
integrated database retrieval system
