Colius striatus (speckled mousebird): 104554775
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Entry
104554775 CDS
T08355
Symbol
SMG7
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG7
KO
K14409
protein SMG7
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104554775 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104554775 (SMG7)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104554775 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104554775 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104554775
NCBI-ProteinID:
XP_010196247
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIRQQRLIFIGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPN
EAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDAGEKPMVTFKENIKPREINR
EQGRIYPPKDVGRDRRDYSTGXXXXXXXXXXDXSKEIVANKNDGKKDNNKRKNETKKCGL
DKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPS
RPGFPPPTYVVPPPVAFSMGTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQ
QRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGL
GKSPPHHSGFQQYSQTDSSKQLWSPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPP
VMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMTDNRVVAQQSNMDRRGKRQGV
FRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPG
RSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSV
AHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFG
PIGTPDNRERRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAM
EDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggac
ttataccagaaaatgctagtgaccgatttggagtatgctttagataaaaaagtggagcag
gacctttggaatcatgcctttaaaaaccagatcacgacgctacagggtcaggcgaaaaac
agagcaaatccaaatcggagtgaagtccaggcgaacctttctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgcca
tgtcgtgtaaagtcttcccagctgggaatcattagcaataagcagacgcacaccagcgcc
atagtgaagccacagtctagctcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgctataggaatcagaccagccaggcagagtcttactacagacatgca
gctcagcttgtcccttctaatggtcagccttataatcagttggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagtgtgtctgacttcatcaaggccttcattaaattccatggc
catgtgtacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaa
cagttcaagagattgttattccaaaaggccttcaattcgcagcagttggtccatattaca
gttatcaatctgtttcaattacatcaccttcgagacttcagcaatgaaactgagcagcac
agctacagccaggatgagcagctctgctggacgcagttactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgca
tatcctcttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgtattc
caggaggcggtggttgatgaaagacggtatatatggccctggctgatttctcttctaaac
agcttccagcctcatgaggaagatctctccaataataatgcaactccccttccagaagaa
tttgagttgcaaggattcctggctctgaggccctcattcaggaacttggatttttccaaa
ggccaccaggcaattacaggagataaggaagggcaacagcgtcggatacggcagcaacgt
ctgatcttcataggcaaatggattgctgataaccagccgaggttgattcagtgtgaaaat
gaggtaggaaagctgttgtttttgacggaaatcccagaattgttactagaggaccctaat
gaagccaaagagagtctggccttgcaggaaacatctattgcagagccgctgtctacagat
gggagccctggactcaaatcagttctatcctctggcagaagcctgaacaacaactgtgat
gcaggagaaaaaccaatggtcacgttcaaagagaacatcaagccacgggaaattaacaga
gagcaggggcgaatctatccccctaaagatgtaggtagggacagacgggactacagcaca
ggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactagagcaaagaaatagtagccaat
aagaacgatggaaagaaggataacaataaaagaaagaacgagaccaagaaatgcggcttg
gataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcccagacagag
atgaggaagactccggtgtctgaagccaggaaaacacctgtaactcagactccaagtcag
gccagcagttctcagttcatccccattcatcacccaggagccttccctccccttcctagc
cggccaggatttccacctccaacctacgttgtcccccctcctgtggctttttccatgggc
acgggctacactttcccaggtggtgtttctgtcccaggaaccttcctccagcccacagct
cactcacctgcaggaaaccaggtgcaaggtgggaaacagtcccacattccttacagccag
caacggccctctggaccggggccaatgacccagggacctcagcaaacaccacctccttcc
cagcaacccctctcatctttaccagctcaggcaacagcacagtccgcaagtcagttacag
gtccaagctctggcccagcaacagcagcagcaatcccctacaaaagctgtgcaaggcctg
gggaagagcccacctcaccactccggattccagcagtattcacagacagactcatcaaag
cagctctggagtccacctcaagtccaaggctcactggggaagatcatgcctgtaaagcag
tcctattacctgcaggcccaggaccctctgaaattatttgaacagtcattacagcctcct
gtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggagccatataac
cagaacccctcagaagtcaaggtgccagaatattactgggactcttcctatggcatgact
gacaacagggtagtggcacagcagtccaacatggaccgcaggggaaaacgacaaggagtc
ttccgcccagagcaggatgctgtctccaggatgacctttgaggaccccaagagctcccct
ctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaagagctgatt
ttctctaatcctcctgatctttacccagctctgctggggcctctcgcctctcttcctgga
cgaagcctctttaagtccctgctggaaaaaccatcagaattgatgtctcagtcatcatcc
ttcctatccctcagtggcttttctcttaatcaggaaagatacccaaataatagcatgttc
aatgaggtgtatgggaaaaacatgaataccagcacaaaaacagaagtcaccccttcagtt
gcccatcaggagacttcattgtattctctctttgaagggactccgtggtctccatccctt
ccagccagttcagatcattcgacaccagccagccagtctcctcactcctccaaccccagc
agcttgccaagctcccctccaacccataaccacaattctgttcctttctccaacttcgga
cctattgggactccagacaacagagagaggagagtcgcagatcgctggaaaacagataag
ccagccatgggagggtttggtctggactatctcccagcaacatcatcgtcttcggagagc
agttggcaccagtccagtgctcccagtggcacctgggcagcccaaggccctcctgccatg
gaggactcttcagctgtgctaatggagagcctgaagtccatctggtccagttccatgatg
caccctggaccctcagccctggagcagctgttaatgcagcagaagcagaagcagcaacgc
ggacaaggcaccatgaacccgccgcactga
DBGET
integrated database retrieval system
