Colius striatus (speckled mousebird): 104555502
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Entry
104555502 CDS
T08355
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
csti04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
104555502 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104555502 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csti02000
]
104555502 (NPC1)
Transporters [BR:
csti02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
104555502 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
ACR_tran
MMPL
Motif
Other DBs
NCBI-GeneID:
104555502
NCBI-ProteinID:
XP_010197255
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MVILCRPSQVLPQVCVWYGECGVASGDKRYNCAYDGPPIPLPEDGYDLMQELCPGLFFGN
VSTCCDVSQLQTLKNSLQLPLQFLSRCPSCFYNLINLFCELTCSPNQSDFLNVTNTIPYY
DPVLKENKSSITELQYFVGERFANAMYNACKDVEAPSSNVKALGLLCGKDVKDCNATNWI
EYMFSKDNGQAPFNIIPIFSDVPVHGMNPMNNATKGCNESMDDSTGPCSCQDCSIVCGPK
PQPPPLPAPWLLFGLDAVYVIIWISYMGFLLIFFALVFGLWCYRRRHFISEYTPIDSNVA
FAVNSHHDNGKVTCGERLGERFENGLRMTFTSWGAFCVRNPRPVILFSVVFIAMCCSGFV
YIKTTTNPVDLWSAPSSQARKEKEYFDTHFGPFFRTEQLIIQAPHSNPDTYSPYPSGDNV
PFGPPLTKEILHQVLDLQDAIVNITASFDNETVTLKDICLAPLAPYNNNCTILSVLNYFQ
NSHSVLDHIDRDEFYVYADYHTHFLYCVRAPASLNDTSTLHDSCLGTFGGPVFPWLVLGG
YDDDNYNNATALVITFPVNNYYNDSRKLMKVLAWEKEFINFLKNYSHPNLTISFSAERSI
EDEINRESNGDVGTVLISYIVMFVYISIALGHIQSCRRLLVDSKISLGIAGILIVLSSVA
CSLGIFSYFEIPLTLIVIEVIPFLVLAIGVDNIFIIVQTLQRDERLQGETLDKQIGRVLG
DVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDFILQVTCFVSLLGLDIKR
QEGNRLDILCCIKSNEETSGVQRSESILFQFFKNVYSPYLLKDWMRPVVIAVFVGVLSFS
AAVIHNVEIGLDQSLSMPDDSYVMDYFNHMSKYLHAGPPVYFVLEEGHNYTSLEGQNMVC
GGMGCNNDSLVQQVFNAAEIGSYTRIGYAPSSWIDDYFDWVKPQSSCCRVYNTTGQFCNA
SVTDPSCTRCRPLTPEGKQRPQGKDFMTFLPMFLSDNPNPKCGKGGHAAYGSAVNFINNK
SDVGATYFATYHTVLKKSSDYIDAMKKARVIADNITETMGIKEKNYRVFPYSVFYVFYEQ
YLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAMIIVNMFGVMWLWGISLN
AVSLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEALSHMGSSVFSGITLTKFGGI
VVLAFSKSQIFKIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKTRAAQERTRGT
ERERLLYF
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtgatactttgcaggccgtcacaggtgcttccacaagtctgtgtctggtatggggaa
tgtggagttgcttctggagacaagagatacaactgtgcatatgatggaccaccaatacca
ctaccagaggacggttatgatttaatgcaggaactctgtccaggtttattcttcggcaat
gttagcacctgctgtgatgttagtcagcttcagactttgaaaaacagcttgcagctgcct
ctgcagtttctttccagatgtccatcatgtttttacaacttgataaatctcttctgtgaa
ctgacttgcagtccaaatcagtctgactttttgaatgttacaaacaccataccttattat
gatccagttttaaaagagaacaaaagtagcattacagagctgcagtactttgttggagaa
cgctttgcaaatgcaatgtataatgcctgcaaagatgtggaggctccatcaagtaatgtt
aaagcactggggctgctgtgtgggaaggatgtcaaggactgcaatgctaccaactggatt
gagtacatgtttagtaaagacaatggacaagctcctttcaacattattcctatcttttct
gatgttcctgtccatggaatgaatcctatgaacaatgctaccaaaggctgtaatgaatcc
atggatgattcgacaggaccgtgcagctgtcaggactgttcaattgtctgtggtccaaaa
cctcagccccctccattgcctgctccttggcttttgtttggtttggatgctgtgtatgtc
atcatatggatctcctacatgggatttctactcatattttttgcactagtttttggactc
tggtgttacaggaggcggcactttatctcggagtacacaccaattgacagcaatgtagcc
tttgctgtgaattctcatcatgacaatgggaaggttacctgtggtgaaaggcttggtgaa
aggtttgagaatggcctaaggatgacattcacatcatggggggctttctgtgtcagaaat
ccacgtcctgttatccttttctctgtggtcttcattgcaatgtgctgctcaggctttgta
tatattaaaacaactacaaaccctgtagatctgtggtcagccccaagcagccaggctcgc
aaggagaaggagtactttgacacacactttgggccgttctttcgtactgaacaacttatt
attcaagcaccacacagcaatccagatacctattcaccttacccatcaggagataacgta
ccttttggacctccacttaccaaagagattctccatcaggtactggatctgcaggatgct
attgttaacataactgcttcttttgacaatgagactgtaacactgaaagacatatgcctt
gctcctcttgctccctacaacaacaactgcactatactgagcgtactcaactactttcag
aacagtcattctgttttagatcacattgatagggatgagttctatgtctatgctgactac
cacactcacttcttatactgtgttcgagcccctgcatcactgaatgacacaagcacgctt
cacgattcctgcttaggaacgtttggtggacctgtatttccatggctggtgttgggggga
tatgatgatgataactataataatgctacagctcttgttattacttttcctgtcaacaac
tactacaatgattcaagaaagctaatgaaagtcttggcatgggaaaaagaatttattaac
tttttgaagaactacagtcatcccaacttaactatatcattttctgctgaacggagtatt
gaagacgaaatcaatcgtgaaagcaatggtgatgttggcactgtgttgataagctatatt
gtaatgtttgtgtatatctccatagctttgggacatatccagagctgtagaagactgctg
gtggattcaaagatctccctgggcattgcaggcatcctgattgtactgagctcagtggca
tgttctctaggcattttcagttactttgaaatcccgctgacactgattgtcatagaagta
attcccttcttggtgctggctattggagtggacaacattttcattatagtccagacactt
caaagagatgaacgccttcaaggtgaaactctggataaacagattggcagagtcttggga
gatgtggcacccagtatgtttctctcatctttttcggagactgtggcattctttcttggg
acactgtctacgatgccagcggttcgcacgttctccctttttgctggaatggctgtgctc
atagactttattcttcaagtcacttgctttgtaagtctcctgggcttggatattaagcgt
caagaggggaacagactggatattctgtgttgcatcaaaagcaatgaagaaacaagtgga
gtccagcgttctgagagcatcttgtttcagttcttcaaaaatgtatattctccatacctg
cttaaggattggatgagaccagtagtaatagcagtttttgtgggtgttctgtcattcagt
gcagcagttattcacaacgtagagattggattggatcagtctctctcaatgccagatgac
tcctatgtaatggattacttcaaccacatgagcaagtacctgcatgcaggtcctcctgtc
tactttgtcctagaagaaggacacaactacacctctttagaagggcagaatatggtgtgt
ggtggaatgggatgtaataatgattcacttgtccagcaagtcttcaatgctgcggaaatt
ggtagctacacgaggataggctatgccccttcatcctggattgatgactactttgactgg
gtgaagccacagtcatcatgttgcagagtctacaataccacaggacagttttgcaatgct
tcagtcactgatccatcctgcactcgttgtcgaccactgactccagaaggcaagcagagg
ccacaaggcaaagacttcatgacatttttgccaatgttcctgtcagacaatcctaatcct
aaatgtggcaaaggaggacatgctgcatacggctctgctgtcaacttcataaacaacaaa
tctgacgttggagctacttattttgcgacttaccatactgtactgaaaaaatcatctgac
tacattgatgctatgaagaaagctcgggttatagcagataacattactgaaaccatgggc
atcaaagagaagaactaccgggtgtttccttacagtgtgttttatgtcttctatgagcaa
tacttgacaattgtgcacgatgctatcttcaacctctgcatctccttgggatcaatattt
ttggtgacaactgtgctacttggttttgaagtgtgggctgctgttgtagtttcaataact
attgctatgataatagtcaacatgtttggagtcatgtggctctggggcatcagcttgaac
gcggtttcattagtaaatcttgtcatgagttgtggtattgctgtggagttctgcagccac
gtgacaagagcgttcaccgttagtaccaagggcagtcgagtagagcgtgcagaagaagct
ctgtcccacatgggcagctcagttttcagtggtatcacactcacaaaatttggaggaatt
gtagtactagctttttccaaatctcagatcttcaagatcttctacttcaggatgtatcta
gcaatggttctgctgggagcaacacacggactcatatttcttccagttctccttagttac
ataggcccatcagtaaataaagctaaaactcgtgctgctcaagagaggaccagaggtaca
gaacgggagagactcctctacttctag
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integrated database retrieval system
