KEGG   Colius striatus (speckled mousebird): 104555804
Entry
104555804         CDS       T08355                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03420  Nucleotide excision repair
csti04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104555804 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104555804 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csti04121]
    104555804 (DDB1)
   03400 DNA repair and recombination proteins [BR:csti03400]
    104555804 (DDB1)
Ubiquitin system [BR:csti04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     104555804 (DDB1)
DNA repair and recombination proteins [BR:csti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104555804 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104555804 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st
Other DBs
NCBI-GeneID: 104555804
NCBI-ProteinID: XP_010197676
LinkDB
Position
Unknown
AA seq 590 aa
MIDLHLLPWQTSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLG
PIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDS
HRETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVR
LVSQEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISSTEMEHE
VACLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFE
SSHYLLCALGDGALFYFGLSLETGSLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPT
VIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPL
YESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAP
HETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVY
PEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINST
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgattgacttgcacctcctcccttggcagacatccattgcagagtgcctgacctacctg
gacaacggggtggtgttcgttggctctcggctcggcgattcccagctggtgaagctcaac
gtggacagcaacgagcagggctcctacgtagtggccatggagaccttcaccaacctgggt
cccatcgttgacatgtgtgtggtggacctggaaagacaaggccaagggcagctggtgacg
tgctcaggcgcctttaaagagggttctctgcggatcatccgcaacggcatcgggatccac
gagcacgccagcatcgacctgccaggcatcaaaggtttgtggcccctgaggtcagactcg
catcgggaaacagacaatacattggtgctgtccttcgttggccagaccagggttttgatg
ttgaatggagaggaggtagaagagacagagctcacagggtttgtggatgatcagcagact
ttcttctgtggcaacgtggcacatcagcagttgatccagatcacctcagcctctgtgaga
ctggttagtcaggagcccaaagctctggtgagtgagtggaaggagcccaatgggaaaaac
atcagcgtggcttcctgtaacagtaaccaagtggtggtggctgtgggacgagccctctac
tacctggagatccgcccccaggagctcaggcagatcagttccacagagatggagcatgaa
gttgcctgcctggacatcacccctctgggggacaccaacggcatgtccccgctgtgtgcc
atcgggctctggacagacatctctgcccgtatcctgaagctgccatcctttgagctgctg
cacaaggagatgctgggaggagaaatcatccctcgctccatcctgatgacaacctttgag
agcagccactacctcctgtgtgccctgggggatggagctctcttctacttcgggctcagc
ctggagacagggtccctgagtgaccgtaagaaggtgaccctggggacacagcccaccgtg
ctcaggaccttccgctccctgtccaccaccaacgtgttcgcctgctccgaccgccccacc
gtcatctacagcagcaaccacaagctggtcttctccaatgtcaacctcaaggaggtcaac
tacatgtgtcccctcaactcagatggctaccctgacagcttggccttggccaacaacagc
accttgaccatcggcaccattgacgagatccagaagctgcacatccgcacagtcccgctc
tacgagtcccccaggaagatctgctaccaagaggtgtctcagtgtttcggggtgctctcc
agtcggatcgaggtgcaggatgccagcgggggtaccactgctctcaggcccagcgccagc
acccaggccctgtccagcagcgtgagcaccagcaagctcttctccagcagcactgcgccg
cacgagacgtcctttggggaggaggtggaggtgcacaacctgctcatcatagaccagcac
acctttgaagtgcttcacgctcaccagtttctccagaacgagtatgccctcagcctggtc
tcctgcaagcttggcaaggacccaaacacctacttcattgtgggcacagccatggtgtac
cccgaggaggcagagcccaagcagggccgcatcgtcgtcttccactactcagacgggaag
ctgcagagcctggctgagaaggaggtgaagggggctgtgtattccatggtggagttcaat
gggaagctcttggccagcatcaacagcacg

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