Colius striatus (speckled mousebird): 104555824
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Entry
104555824 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: usherin-like
KO
K19636
usherin
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csti03037
]
104555824
Cilium and associated proteins [BR:
csti03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104555824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Galaxin_repeat
Motif
Other DBs
NCBI-GeneID:
104555824
NCBI-ProteinID:
XP_010197707
LinkDB
All DBs
Position
Unknown
AA seq
2785 aa
AA seq
DB search
MRNTLLSSVAGVLTGLHPFTNYAVTLTACTLAGCTESLHALNISTPQEAPEGVQSPTAIS
FPTFLLINWNPPKTPNGIITQYTLYMNGVPIYFGNGTKYVVKDLAVFTPHQFLLTACTLA
GCTNSSQVTLFTAQLPPSHVDAPDLTVLDSRTIYVQWKEPVELNGILDRYIIYIANNEQN
FTKWNVTYNSTELFLDFTIQQLFPGTEYLIKLAACTEGGCSISEASTALTDESTPEGVPA
PKAQSYSSDSFNISWTKPEYPNGIITSYGLYMDGVLMQNSSHLSCYAYGLAPWSLHSFRV
QACTAKGCALGPLVEARTMEASPKGRIDVFAIVDGSKEVQLKWLAPNKPNGKLTYTILVT
GLFYADQANANYSIVNGTHMLCSSNESNVWVSIEGLIPFSNYTMQVNASNSQGSLISDAI
TVVMPPGAPDGVMPPRLSSATPTSLQVVWPTPVRNNAPGAPSYRLQMRRRHSAGDILDLL
SSPTASLQYKVGDLQPYTEYEIRVVASNAYGNTYSNWTSMTTAEDRPGPLDPPLLLNVTA
RAASITWQHPLKPNGILTHYNIYQNGQLHTTVLGNRSNCTVEDLHPYTLYAFQVEGCTSK
GCSLSPKTPEIQTLPDAPEGIPAPELYSDTPTSVVISWQQPAHSNGLVENVTIERRVKGT
EQISTVVTLPLSQSMSYIDQSTALSPWQKFEYRVLMSTLHGGTNSSSWSEVTTRPSRPAG
VQPPDAEVLGPHSVKVSWKPPLIQNGEILNYEIRMPDPRIVITGNNSSALSYLVTNLIPY
TNYSVTVIACSGGDGFLGGCTESLPTGVTTPSTVPQSVSPLSVTPISESFIAISWQPPLR
PNGPHLRYELLRRKIQQPLASNPPEDLNLWHNIYSGTQWFYEDKGLSRYTTYEYKLIVHN
EVGYTSSEEVIATTLAGLPEKGSILVARAVNHTAVEVEWSKPTLQDLQGDVAYYTLFLNS
TDNRRSLRIQPDVNSLVISDLQPNMEYQIFFQVFNGAHSINSEVVHVTTSDGEPEGMFPP
EVVIINSTAVRVIWTSPSNPNGVVIEYSIFVNNKQYKTGMNEPGSFLLADLSPFTVYDVQ
IEACTIYACVRSNGTQITTVEDEPKQLPAPIIHIIGSRSLQINWASPGQPNGIILGYELF
RKAWQRCTPSKTPWSNTSNRKCISLQCKKEENVCGEMCYHPDLKVCCNGILHDNKPGFQC
CEDKYIPFILNSPGVCCGGQTHAAQPKHRCCGGYYTRVLVGEVCCPNEEQNRVSVGIGDS
CCQGMPYSTSGNQICCGGSLHDSFNQQCCGGKVISTDLVCCGDEKEGTAHRPLPGMFCCG
QEYVNMSDTICCSGSSGEFLAHIRRNDQVPVKCCETELIPKSEECCNGVGYNPLKYVCSD
KISAGMMMKVKEECKANILCPLSMEATAYCGKCDFDPRENICAWIKGSQSATEKEIKEGM
CPAEEEIVYKGGPNQYSFTDLNLEPFITYEYRVAAWNSYGQGFSEISRAVTKQDVPQGVS
PPKWAKVDNREDMILLNWEEPLQPNGLIIHYIILRNGIERFRGTEMSFTDTSGVQPYQEY
SYQLRACTVAGCADSSKVVAVTVQGVPENVQPPNISALNSTALHLGWIAPQKPNGVIREY
QXXXXXXXXXXXGKGLIHTDAASTMQHIVSGLQPYTNYSFMLTACTSAGCSSSHPLSGQT
LQAAPHGVWPKPHHIIVSSTEVEIYWSEPNKPNGLITQYRLFRDGEQIFLGGSTDLNFTD
VNLQPNNRYVYQLEASTWGGSNTSDKYVIQTPVGTPEKIHVPYNVTVIDAYSIFLAWDKP
GIFVTNVPLDYNILLNASSPTLLVKPVGHAHFAFVDGLDPYSLYEIRIQACQNGGCGVGH
RTYARTDEAPPKELSPPIVKAVGSALIQVKWAPPKKPNGIITNYFIHRRPVGSQEELLLF
IWAEGALEFIDASDTLQPFTLYEYRVRAQNAVGSVDSLWASTQTLEALPWGMGAPWAQAT
SAYSVRLNWTQPVSPNGVISLYRVVYQEKRDDPTFSIPAVTALTVTGTKHQAHLFGLKPF
TTYHIHVVAVNNAGQVSSPWTSVRTLEASPSGLSNFTVEKKENGRALLLKWSEPSQPNGV
IKTYNIFSDDNLEYSGLSRQFLFRRLEPYTLYTLILEACNAAGCTRSPPQPVRTDEAAPV
SQMAPVIWAVNATNVELSWLQPINPNGKIIRYEVIHRCTKESAAGYRAKTEDEKIVFTEY
NTESNTFIYNDKGLQPWTRYEYKIRTWNAAGYADSSWTVAKTSQTAPKGLAVPRLSLVSV
NPRKVLISWAPPAQPNGILQSYRLLKNDVLYPFSFDAATFNYTDEDLLPYSMYNYAIVAC
TMGGCSTSDPAAIQTLEAPPALVDPPSLQAVSATQINASWAPPQIQNGHITRYILKLNNE
ERYPGKSLQMLVSNLQPYTQYDFALIACTAGGCTSSISQSVMTMEAPPLNMEAPRLLVMG
SESIEITWKLPANPNGKITSYELRRDGVLVYSGLETRYLDFTLMPGMEYSYTITANNSQG
SVTSPPAQIKTNPSAPSGMLPPRLQAWSSKEVLVAWDPPIKVNGDIRNYTISIHKPAETE
KKTVYFDASHVSFLRRSYIVAELQPYSRYEVQVQACTELGCASSEWASVQTLEAPPAVQP
APLIEIQTTAGGFQLTSSILWTGPQQPNGKILYYELYRRQTTQSHINLDLTLVYNGSSTS
FKDDKLLPYTEYEYQVWSVNSAGRTPSNWSRCRTGPAPPEGLGAPLFDSVASTVAVVNIS
PPLKPNGVVSIYRLFSNDTRGTDVV
NT seq
8355 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacaccttgctttcttctgttgcaggtgtattgacaggcttgcatcccttcaca
aactatgctgtaaccctaactgcttgcactttggctggctgtactgagagcttgcatgca
ttgaacatctccactccacaagaagcccctgaaggtgtgcaatcacccacagctatatcc
tttcctacgttcctgctaataaattggaatccacccaaaactccgaacggtattattaca
caatatactttatatatgaacggagtaccaatttactttggaaatggaactaaatatgtt
gtaaaagatttagcagtttttacgccacaccagtttctgctcactgcatgcacgcttgct
ggctgtacaaacagttcccaggtcaccttgtttacagcacagctgccaccatctcacgta
gatgccccagacctgacggttttggattctagaacaatatatgtacaatggaaagaacca
gtagaactaaatggcatcctagatcgctatataatttatattgccaacaatgagcagaat
tttacaaagtggaatgtaacctataacagcacagaactttttctggattttactattcag
cagcttttcccgggtactgaatacctcataaaattagctgcttgcactgaaggtggatgt
tcaataagtgaagctagcacagctctgacagatgagagtacaccagaaggtgttcctgct
ccaaaagcccagtcgtattcatctgactcctttaacatctcgtggactaagcctgagtat
ccgaatggtattattactagctatggattgtatatggatggtgttctgatgcaaaattca
tcacacctaagctgttatgcttatggacttgcgccttggagtctgcattccttcagagtc
caagcatgtactgcaaaaggttgtgctttgggtccattggttgaagctcggaccatggaa
gcatcccccaaaggaaggattgatgtatttgctattgttgatggttccaaagaagttcaa
ttaaaatggcttgccccaaataagccaaatggaaaattgacttacacgatccttgtcact
ggtctcttctatgctgatcaagctaatgctaattattctattgtaaatggtactcacatg
ttatgcagcagcaacgaatccaatgtatgggtatctattgaaggactgattccattttca
aactacacaatgcaagtgaatgcttccaacagccagggcagcttgataagtgatgctata
acagtagtcatgcctccaggagctccagatggcgtgatgcctccaaggctttcatctgcc
actccgaccagtcttcaggttgtctggcctacaccagttcgcaacaacgccccaggcgcg
cccagctaccgactccagatgcggaggaggcattctgctggtgacattttagatttgctt
tccagccctactgcttccttacaatacaaggtgggagatcttcagccgtacactgagtat
gagataagagtggttgcctccaatgcttatggcaatacttatagcaactggacttcaatg
actacagcagaggacagacctgggcctttagatccaccacttctgttgaatgttacggca
agggcggcaagcattacatggcagcatcctttaaagccaaatggcattctcactcattat
aatatttaccaaaatggccaactgcatactacagtgctaggaaatagatctaattgcact
gtagaagacttgcatccttacactctctatgcatttcaggtagaaggatgcacttctaaa
ggatgctctctttcacctaagaccccagaaatacagactcttccagatgctcctgagggt
attcctgctccagagctgtattctgatactcccacttctgtggtcatatcctggcaacaa
cctgctcactcaaacggtttggtggaaaatgttacgatagaaaggagggtgaaaggaaca
gaacaaatatcaactgtggtgactctccccctcagtcagtccatgagctacattgaccag
agtactgctctgagcccttggcagaaatttgaatacagagtgctgatgagtactcttcac
ggaggcacaaacagcagttcatggtcagaagttactacacgaccatcaagacctgctggt
gttcagccacctgatgcagaagtattaggaccccattcagttaaggtctcttggaaacct
cctctgatacaaaatggcgaaatccttaactatgagatccgcatgcctgatccacgaatt
gtcattactgggaacaattcatcagcgttaagttatttggtgactaatcttataccctac
acaaactactcggtcactgtaatagcttgttctggaggtgatggctttctaggaggctgc
acggagagtttgcctacaggagtaactacaccttcaacagttcctcagagtgttagtcca
ttgtctgtgactccaatcagcgagtcctttattgctatttcttggcaaccaccgctaagg
ccgaatggtcctcatctgagatatgagctcctgagacgtaaaatccagcaaccacttgca
tcaaatccccctgaagatttaaatctgtggcacaatatttactcaggaactcagtggttt
tatgaagataagggtcttagcaggtacacaacatacgagtacaagctcatagtgcacaac
gaggtaggatatacatcaagtgaagaagtgatagctactacattagcaggattaccggag
aaaggaagtatcctcgttgcacgtgctgttaatcatactgctgtagaagtggaatggtca
aaaccaacactgcaagatttgcaaggagatgttgcatattacaccctcttcttgaattct
actgataatagaaggtctctgaggatccagcctgatgtaaactctctagtcataagtgat
ttgcagcccaacatggagtatcagatattttttcaagtttttaatggagcccacagcatc
aacagtgaagttgtgcacgtgactacctcagatggagagcctgagggcatgttccctcca
gaggttgtcatcatcaacagtacagctgtacgtgtcatctggacatcgccttcaaacccg
aatggtgttgtcatagagtactctatctttgtaaataataaacagtacaagactggaatg
aacgagccagggtcctttcttttagcagatttgtctccgttcactgtatatgatgtacag
attgaagcctgcacaatatatgcctgtgtgagaagcaatgggacccaaattacaactgtg
gaagatgagccaaagcaactgccagcacccattattcacataattggctcaagatctctt
caaatcaactgggcatcaccaggacagccaaacggcattatcttgggatatgaactcttc
cgtaaagcgtggcagaggtgtacaccatcaaagactccatggagtaacacaagtaataga
aagtgtatctcattacaatgtaaaaaggaagaaaatgtctgtggagaaatgtgttatcac
ccagacttgaaggtgtgttgtaatgggattctgcacgacaataaacctggcttccagtgc
tgcgaggacaagtacattccatttattcttaattcaccaggggtttgctgtggtggtcag
acacatgctgcgcaaccaaaacatcggtgctgtggtggttattacactagggtgttagta
ggagaagtatgttgccctaatgaagagcaaaacagagtttcagttggaattggtgactct
tgctgccagggaatgccttactccacgtcaggcaatcagatctgctgtggtggatccctc
catgacagttttaatcagcagtgctgtggtggaaaagttataagcacagatttggtctgt
tgtggtgatgaaaaagaaggaactgcacaccgacctctcccagggatgttctgttgtggg
caggaatatgtgaatatgtcagataccatatgctgctcaggttccagtggtgagttccta
gcacacattaggaggaatgaccaagtgccagtaaaatgctgtgagactgaacttattcca
aagagcgaagaatgctgtaatggagttggatataatcctttgaaatatgtttgctctgac
aagatttcagctggaatgatgatgaaggtaaaagaagagtgcaaggctaatatcctttgt
cctttatctatggaggcaacagcatattgtggaaagtgtgactttgatcctagggagaat
atctgtgcatggataaaaggttcacagagtgctacagaaaaggagataaaggaaggtatg
tgtccagctgaagaggagattgtctacaaaggaggtccaaaccagtattcatttacagac
ttgaatctcgaaccgtttatcacatatgaatacagagtggctgcttggaatagctatgga
caaggcttcagcgaaatcagcagagctgtcactaagcaagatgtaccacagggtgtaagt
ccaccaaaatgggccaaagtggataatcgggaagatatgatccttctaaactgggaagaa
ccgcttcaaccaaatggtcttattattcactatatcattctccgaaatggaattgagcgt
ttcagaggaacagaaatgagcttcacagatacaagtggtgtccagccataccaagaatat
tcataccagctgcgagcctgcactgttgctggttgtgcagatagcagcaaggtagttgca
gtcactgtccaaggagtcccagagaatgttcagccgccaaacatcagtgctttgaactca
acagcattgcatttaggctggatcgcaccccagaaaccaaatggtgtcatcagagagtac
cagannnnnnnnnnnnnnnnnnnnnnnnnnnnnntagggaaaggacttatacacaccgat
gctgcaagcacaatgcagcacatcgtctcaggtctgcagccatacactaattacagcttc
atgcttactgcatgcacatctgctggatgttcttctagccatccactttcaggtcaaact
ttacaagctgctcctcatggggtatggccaaaacctcatcatatcatagtcagctcaaca
gaagtggaaatctactggagtgaaccaaataaacccaatggactcattactcaatatcga
ttatttcgtgacggagaacagattttcctgggtggcagtacagacctgaatttcacagat
gttaatctgcaacctaacaatagatatgtttaccagctggaagccagcacttggggtggc
agtaacactagtgacaaatatgttatacaaacaccagtaggaacaccagagaaaattcat
gtcccttataacgtcacagtaattgatgcatattccatatttctagcttgggacaagcca
gggatatttgttaccaatgtgcctctagactacaacatcttactaaacgcaagcagcccc
accctactggtgaagccagtaggccacgcacattttgcttttgtcgacggcctagacccc
tacagcctgtatgagataagaatacaggcatgtcagaatggtggctgtggagtgggtcac
cgaacatatgcaagaactgatgaagcacctcctaaagaattgagtccacctattgttaaa
gccgtgggatctgcactcatacaagtgaaatgggcaccacctaagaaaccaaatggcatc
attactaactattttattcacagacgtcctgtgggcagtcaagaggagctacttttgttc
atctgggctgaaggagctttggaattcattgatgcatctgatactctacagccttttact
ctctatgaatatcgtgtcagagctcaaaatgctgtgggatcagtggacagcctgtgggct
tcaacccaaactctggaggctttgccatggggcatgggagccccttgggcacaagcaaca
agtgcatactcagtgcggttgaactggacccagcctgtctctcccaatggtgttatatct
ctttatcgagtagtctatcaagaaaaacgcgatgatccaacatttagcatcccagctgtt
acagcactaaccgtaacgggaacaaagcatcaggctcatttatttggattgaaacctttc
acaacatatcatattcatgtcgtagctgtaaacaatgctgggcaggtttcaagcccctgg
acatctgtgcgcacattggaagcttcgcccagtggcctgagcaacttcactgtggaaaag
aaagaaaatggcagggctctactgctaaagtggtcagagccctcccagcccaatggtgtg
attaagacctacaatattttcagcgatgacaacctggagtacagtggtttatctcgccag
ttcctcttcagacgccttgagccatacaccctctataccctcatactggaggcttgcaat
gcagcaggctgcactcgttccccaccccagccggtccgaacagatgaagcagccccagtc
tctcagatggcacctgtaatctgggcagtgaacgctaccaatgttgaactgagctggttg
cagccaattaaccccaacggaaaaataattcgttatgaagttattcacagatgcacaaaa
gaaagtgctgcagggtacagagcaaaaacagaagatgagaaaattgttttcacagaatat
aacactgaaagtaacacattcatatataatgataaaggtttgcagccatggacaaggtat
gaatataaaatacgcacctggaacgcagcaggctatgctgacagctcctggacagtggca
aaaacaagtcaaactgctcccaaaggtcttgctgtccccaggttatccttggtgtcagtt
aacccccgtaaagtgctcatctcatgggcccccccggcacagcccaatggtattcttcag
tcatacaggctgctaaagaatgatgttctctacccgttcagctttgacgctgccactttc
aactacacagacgaagacttgctgccctattcaatgtacaactatgcgatagttgcctgt
acgatgggaggctgctctactagtgacccagctgccatacagacgctggaagcacctcct
gccttagtggacccaccatctctgcaggctgtcagtgccacgcaaattaatgcatcttgg
gcacctcctcaaatacaaaacggacatatcaccaggtacatactgaaattaaacaatgaa
gagcgttatcctggcaaaagtttgcaaatgttggtttctaatctacagccttacacgcag
tatgattttgcactgattgcttgtactgctgggggctgcacatccagcatatcccagtca
gtgatgaccatggaggctccgccattaaatatggaagctcccagactgcttgtcatgggc
tcggagtcaattgagatcacatggaaacttccagccaaccccaatggtaaaatcacgagc
tacgagctaaggagggatggtgttcttgtttactcaggtctggaaactcggtatcttgat
ttcaccttaatgccaggcatggagtacagctacactatcacagcaaataacagtcaaggg
agtgtgaccagcccaccagctcagataaaaaccaacccctctgctccatctgggatgttg
cctcctaggttgcaggcatggtcctcaaaggaggttttggtggcctgggatcctcctatc
aaagtaaatggtgacattagaaattacacaatctcgatccacaagcctgctgaaacagaa
aagaaaactgtttactttgatgcatcacatgtttccttcctgagacggtcgtacatagtg
gcagaactgcaaccctacagtaggtatgaagtacaggtccaagcatgcacagagctgggt
tgtgcctctagtgagtgggcatcagtacagactctggaggcaccgccagcagtgcagccg
gctcctctgatagaaatacagacaacagctgggggcttccaactgacttcttccatcctg
tggactgggccccagcagccaaatgggaagattttatactatgagctttacagaaggcaa
acgactcaatcccacataaatttagatctcacacttgtttacaatggttcttcaacctcc
ttcaaagacgacaagttgctgccttacacagaatatgaatatcaggtgtggtcggtaaac
tcagcgggccggacaccgagcaactggtcccgctgccggacaggccctgcccctcctgag
ggcctgggagctcccctctttgactcagtggcatccacagtggctgtggtgaatatcagc
cctcctctgaagccaaatggggtggtcagtatctacagactgttttctaatgacaccaga
gggacggacgtagtg
DBGET
integrated database retrieval system
