Colius striatus (speckled mousebird): 104556445
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Entry
104556445 CDS
T08355
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104556445 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csti02000
]
104556445 (ABCA12)
Transporters [BR:
csti02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104556445 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104556445
NCBI-ProteinID:
XP_010198603
LinkDB
All DBs
Position
Unknown
AA seq
2408 aa
AA seq
DB search
TVLNSLNFSDNSACGDNLSVLFSVAQDELHTNNLLERLKVAFSLMKWKYYSGVWDVVESF
VYTQRSVNEAGAFEKLLEAMANNFANNVSVLEIIEASHYFLKRLNFSDLLNEFNISSSSA
FLSNKISFENVFDTVTHNFIVMAETLYNKTLPWTQSDQTLSPTRLITQFLFLEFENTILE
VTMNNSYNPYLMCLINATEAEASKLTENITLLLTQTHLKKNSFMQNNTSEKHSSIPELLK
LKISHFRDLTTLLCDYESFKSIQHICHLPNVSFGELCEQGRSHEQLLHAIELSSQVVTNV
LNPRRISQELKNILIGDTTNIETQMKWFQENIPEMAFFQEIPRYMAALNSMLNLTEDVSD
SSKQEKLRDVFKNVVQLKEDLKNTTGMSTASIDALLEASLPENSSQLVSQILQLESCNIN
PADPQLQRVVEEFCNLSLPERTRETYILGVTLLRHLDIYHFLYKMFFPKELQKPVDKMLG
LLTKMKYFRHKVESEVDPLLQAINSLKKLRQSRNMPLTKALFKPNNFKMTRGTFKSMSKV
LCNQEITPLFFESLLPDFRDPVSNSSSVEDVYVQKMMRKYGIPHNSTPFCLSFYLDLVKT
PTGALIWSFLKPMVLGKILYTPDTIETRAIMGKSNATLKQMAELAMKSQEWLDMSPVIMN
SLTKLNQTVPMIKNTLQNPFVQVFIKMMVDLDASELLSQINQLDDIRLELQDNTDIVDQL
NILATLAVNVSSCVSFNRIQAVRNVEEMEMVAKELFLKNELFASIIFKLPSSHSSPGRSV
YGGLALPPVLNYTIRMSSRITQTTNRIRERIWTVGPHNSTSQSQIYSRAFIYIQDSIERA
IIELQTGKNPEEIAVQVQAMPYPCYNKDMFLTSVTYSLPFALMAAWVLFIADFVKTLVQE
KDLRLYEYMKMMGVNASSHFIAWFIECAIFLLITVTFLIIVLKVGDILPKTNTALLFLYL
MDYSLSIIAMSYFISVFFNNTNIAALVGSLVYILTFFPFIVLLVIENHLSFSVKSLLSLL
SPTAFSYASQYIARYEAQGIGLQWDNMYKSPMIGDNTSFGWMCWLILIDSFIYFILGWYI
RNVFPGRYGMAAPWYFPLLPSYWVDYNSYLPFWNEKRGSLLFTKLMLRKEATLNNKICAP
PAHLEPEPTDLTLGVSLHGITKVYGSKAAVNNLSLNFYEGNVTSLLGHNGAGKTTTISIL
TGLFPTSSGTIFVYGKDIRTDQEVIRKDMGVCMQHNVLFNYLTTKEHLLLYGYIKVPHWS
KQELYQEVKRTLKETGLYSHRHKLAGSLSGGMKRKLSIAIALLGRSRVVILDEPTTGVDP
CSRRSIWEIISKNKKGRTIILSTHHLDEAEVLSDRIAFLEHGGLKCCGSPFYLKETFGDG
YHLTLTKKKNMTEECDTAAVTSLIQSYLPEAYLKEDIGGELVYVLPPFKSTVSGAYQALL
RALDRSLSDLHLGCYGISNTTVEEVFLNLTKELMKDQREDAELPQQLPGASDQISSDEMS
VSTDTFTERDDQLLIRSKSLQGLPLLLKKTSALFIKRFHHTRRDVRGFIAQVILPVLFVM
AAMGLGTLRTKETEYPELILSPSLYGTSDQADFFGNFNETTDALVASMLAFPGTDNTCMN
ESNSQCLKEDMLGQWIISGNQRTRYSACNCTDGIQMCPQTNYTPPHRRTFSTRTLYNLTG
QNVETYILATTKDFLQKRYGGWSFGMPLTTDLQFDIRPVPPNRTLTKVWYNPEGYHSLPA
YLNSLNNFILRANLPENETSRYGIFLSAHPYPGGQSQEQVMLNSLLDIIVSMSVLVGYSI
TTASFVLYVVREHQTKAKQLQHISGIGMTSYWVTNFVYDLILFMVPIGLSIGVISSFQIP
AFCNNNNLLAVFLLLLLFGYATFSWMYLLAGVFKETGMAFIVYVCVNLFFGINTIITHSV
VFLLSQEKATDKGLHDLAENLRHVFLLFPQFCFGYGLIELSQDQALLGFLKAYGVDYPDK
TFELDKTTSKLFAMFIQGTVFFAIRLTVHDRMIQRVWNNILEFLFDRVHGKASVLPIPGE
EDRDVQAERNRVESGKADFDVVQLQNLTKVYHLPHRRIVAVKNISLGIPAGECFGLLGVN
GAGKTTIFKMLTGDIGASSGRLRVQDCSGSLNDISEAHWSLFGYCPQEDALDDLLTVEEH
MYYYARLHGIPEREIKGVVLQLLHRLNLMAYKDRVTSMCSYGTNRKLSTALALIGNPSIL
LLDEPSSGMDPNAKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGSFQCVG
SLQHIKSRFGRGFTVKMHLNSNTVCTEMLTDFMKSHFPNTCLKDQHFNMVEYHVPVSAGG
VANIFDLLEASKAAFNIRHFSVSQTTLEEVFINFAKDQADPDGVDAGPDVTLDSSDTSSH
DSTISSIY
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
acagtactgaactctctaaatttctctgacaactcagcatgtggggataacctgtccgtg
ctcttcagtgtggcacaggatgaactccacacgaacaacctgttggaaagactcaaagtt
gccttcagcctcatgaaatggaagtattactcaggtgtctgggatgtggttgaaagtttc
gtatacactcaaaggagtgtaaatgaagcaggtgcctttgaaaagctgttggaagcaatg
gcaaacaactttgccaacaatgtgtcagttttagaaatcatagaagccagtcactacttt
ctcaagaggctaaacttctctgatctgctaaatgaattcaatataagttccagttcagct
tttctctccaacaaaattagttttgagaatgtgtttgatactgtcactcataactttatt
gtcatggcagagaccctgtacaacaagactctaccttggactcagagtgaccaaactctg
tcaccaaccagattgatcacacaatttctgtttttagaatttgaaaacaccatcttagag
gtcacaatgaataacagctataacccttacctgatgtgtttaataaatgccactgaagct
gaagccagcaaactgacagaaaacatcacacttcttttgacgcaaactcatctgaaaaag
aactcttttatgcaaaataatacctctgagaaacattcatccataccagagctcctgaag
ctaaaaatatctcatttccgtgatctgacaacacttctttgtgactatgagagctttaag
tcaatacagcatatttgccatctccctaacgttagctttggagaactgtgtgaacaaggt
cgatcccatgagcagctcctccatgctattgaactgagcagtcaagttgtgaccaatgta
ctgaatcccagaagaatctcccaagagcttaaaaatatactgatcggggacaccacaaac
attgagacacaaatgaagtggtttcaagaaaatataccagaaatggctttctttcaagag
attcctcggtatatggctgctttgaattccatgttgaacctcactgaggatgtatcagat
tctagcaagcaagaaaagctgagagatgtgtttaaaaatgtggtccagctcaaagaggat
ctcaaaaacacaacaggaatgtccacagccagtatcgatgctcttctggaagcatctctt
ccggaaaacagcagtcagctcgtttctcagatcctccagctggagtcttgtaacatcaat
cctgctgacccacagctccaaagagtagtggaggagttctgcaatctctctcttccagag
aggactcgtgagacgtacatcctgggggtcactctgttacgacacttggacatttaccat
ttcttatacaagatgtttttccctaaggaacttcagaaacctgtggacaagatgttaggc
cttctgacaaaaatgaaatatttcagacacaaggttgaatctgaagttgatccattgcta
caagctattaactcactgaaaaaactccgtcagtctagaaatatgccactgactaaggca
ttatttaaaccaaacaactttaagatgacacgtggcacatttaagtccatgtcaaaagtt
ctctgcaatcaggagattacacccctgttttttgagtccttgcttccagatttcagagac
cctgtaagcaacagttcttctgtggaggatgtctatgtccaaaagatgatgaggaaatat
gggatccctcataactccacaccattttgcttatccttttacctggacctggtcaagacc
ccaactggagctttaatttggtcttttttaaaaccaatggtgcttggcaagatcctttat
acaccagatacgatagaaactcgggcaatcatgggcaagtctaatgcgaccctgaagcag
atggctgagctagccatgaagtctcaggagtggctggacatgtctcctgtcatcatgaat
tcactgactaagttaaaccagacagttccgatgatcaagaacaccctgcagaatcccttt
gtgcaggtttttattaagatgatggtggatttggatgcatctgaactgctgagtcaaata
aaccaactggatgacattcggctggaattacaggacaacactgacattgttgatcagctg
aatatattagctacccttgctgtaaatgtgtcctcctgtgtctcgtttaatcgcattcag
gcagttagaaatgtagaagaaatggaaatggtggctaaagagctctttctgaagaacgag
ctttttgcaagtatcattttcaagctgccttcaagccatagcagccctggacgctcggtt
tacgggggcttggccctccctcctgtgctcaactataccattcgaatgagcagcaggatc
acacaaactaccaacagaataagggagcgcatttggacggtgggccctcacaactccaca
tcacagagccagatttacagccgggcgttcatttatatccaggacagcattgaaagagct
attattgagttacagactggcaagaatccagaggaaatagctgttcaagtccaggccatg
ccttacccttgctacaataaggatatgttcttaaccagcgtgacctactctcttccattt
gctctgatggctgcctgggtgctgtttatagctgattttgttaaaacacttgttcaagag
aaagatctaaggctttatgagtacatgaaaatgatgggtgttaatgcaagcagccatttc
atcgcctggttcatagagtgtgccatcttccttctaattactgtcaccttcctcatcatt
gttctaaaagtcggtgacatccttcccaaaacaaacacagcactcctattcctgtacctt
atggactacagcctgtccatcatagccatgagctacttcatcagtgttttcttcaataac
accaacatagcagctttggtgggcagtcttgtgtacatcctcaccttcttccccttcatc
gtgttgcttgtcatcgaaaatcatttaagcttctctgtgaagagcctactgagtctgttg
tctccaactgcattcagttatgcaagtcaatacattgctcgatatgaggcacagggcata
ggtctgcagtgggacaacatgtataagtccccaatgattggagacaacacttcctttggc
tggatgtgctggctcattctgatagactctttcatttacttcatcctgggatggtatata
aggaatgttttcccgggcagatacggcatggctgctccctggtatttcccattgcttcca
tcttactgggttgactacaacagttacctccccttctggaatgaaaaacgaggcagcctt
ctcttcaccaagctgatgttaaggaaagaagccaccctcaacaataagatatgtgccccc
ccagctcatctggaaccagagcccactgatctcaccttgggagtctccctccatggcata
acaaaggtttatggatccaaagctgcagtgaacaacctcagcctcaacttctatgaaggg
aatgtcacttccctgctgggacacaatggagctgggaaaacgacgaccatatctatattg
actgggttattccctacatcatcaggtactatctttgtgtatggcaaagacattaggaca
gaccaggaagttatcaggaaggacatgggtgtgtgtatgcagcacaatgtgctctttaac
taccttaccacaaaggaacacttgctgctctatggctacatcaaagtccctcactggagt
aaacaggagctctaccaagaagtgaagaggactttgaaggagactggactgtacagccac
cgccacaagctagctggctccctgtctgggggaatgaagaggaagttatctatagctatt
gccctcctgggcagatcaagggtggtgatactagatgagccaaccacaggggtggatcca
tgctctcgaagaagtatttgggaaattatctccaagaataaaaaaggcagaaccatcatt
ctctcaacacatcacttggatgaagcagaagttttgagtgaccgaatcgccttcctcgag
catggagggctcaaatgttgtggttcaccattctacctcaaggaaacctttggtgatgga
taccatctcaccctcacaaaaaagaagaacatgacagaggagtgtgacaccgcagcagtg
acctccttgatccagtcctacctcccagaggcttatctcaaagaggatattggtggagag
cttgtctatgtacttcctcccttcaagtccacagtctcaggggcctaccaggcacttctc
agagccctcgataggagcttgagtgatctccaccttggctgctatgggatttcaaacaca
actgtggaagaggtgtttctcaatttgacaaaagagctaatgaaggaccagagagaagat
gctgaactgccccaacagttgcctggagccagtgatcaaattagcagtgatgaaatgtct
gtgagcacggataccttcacagaaagagatgatcagctcctaattagatcaaaaagcctg
cagggtttaccattgctacttaagaagacatcagctttgttcattaagagattccaccat
acccggcgggatgtcagaggctttattgctcaggtcatcctcccggtcctctttgtgatg
gctgccatggggcttggaacgctgagaacgaaggagaccgaatatcctgaactaattctt
tccccctctctgtatggcacatccgaccaggcagacttctttgggaattttaatgaaacc
acagatgctttagttgcttcgatgctggctttccctggaacagataacacatgcatgaat
gaaagcaattcgcagtgcttaaaggaggacatgcttggccagtggattatcagtggaaac
cagagaacaagatattctgcctgcaactgcacagatggcatccagatgtgtccacagacg
aactacactccccctcacagaaggaccttctccacacggacactttataaccttacaggg
caaaatgtggagacctacattctggcaactaccaaagacttcctgcaaaaacggtatggt
ggctggagcttcggaatgcctttgactacagatctccagtttgatatcaggccagtgccc
cccaacagaacattgactaaggtatggtataatcccgaaggttatcacagccttccagcc
tatctgaacagcttgaacaacttcattcttcgagctaacttgccagaaaatgagacttcc
agatatggtattttcttatcagctcacccgtatcctggaggacagagtcaagagcaagta
atgctcaacagcttacttgacatcatagtttcaatgtctgttttggttggctactctatc
acaacagcaagctttgtactctatgtggtaagagaacatcaaaccaaagccaaacaactg
cagcatatttcaggcattgggatgacaagctattgggtgactaacttcgtttatgatctg
atactttttatggttcctataggactctcaataggagtcatttcaagcttccagatacca
gctttctgcaacaacaataacttactggcagtatttcttctgctgttactttttggatat
gcaacattttcatggatgtacttgctggctggagttttcaaagaaacaggaatggccttc
atcgtttatgtctgtgtcaacttgttctttggcatcaacaccatcattactcactcagtt
gtatttctgctctctcaagagaaggccacggacaagggcttgcatgatcttgctgaaaac
ttaaggcatgtgttccttctgttcccacaattttgctttggctatggcttgattgaactc
tcacaggatcaagcactgctgggcttcttaaaagcctatggagtggactaccctgacaaa
acctttgaactggacaagaccacatccaagctgtttgccatgtttattcagggcactgtg
ttttttgccattcgtcttacagttcacgacaggatgattcagagagtctggaacaacata
ctagagttcctgtttgacagagtacatggcaaagcgtcagttctgccaatcccaggtgaa
gaggacagggatgtccaggcagagaggaatcgcgtggagtcaggcaaagctgacttcgat
gtggtgcagctccagaatctcacaaaggtctaccaccttcctcacagacgcattgtggct
gtgaaaaacataagcctcgggattccagctggagagtgctttggcttgcttggtgtgaac
ggagctggaaagacaaccatctttaagatgctgacgggtgatataggagcatccagcgga
aggctgcgggtccaggattgttctgggtccttgaacgacattagtgaggcacactggtca
ctctttggctactgtcctcaagaagatgccttggatgacttgctgacagtggaagagcac
atgtattactacgctaggcttcacggcatcccagagagagagatcaaaggagttgtactc
cagcttctccatcgcctgaatctgatggcctacaaagacagagttacctcaatgtgcagt
tatggcactaacagaaagctgtcgactgctctggctctcattgggaatccatcaattctg
ctgctggatgaaccaagctccggaatggatccaaatgcgaaacgccacctgtggaaaatc
atcagtgaggaagtgcagaacaaatgctcagtgatactcacatcccacagcatggaagag
tgtgaggcgctctgtaccaggctggctattatggtgaacgggagtttccagtgtgtgggc
tctctgcagcacatcaagagcaggtttggaagaggattcactgtgaagatgcacttaaat
agcaacacagtttgtactgagatgctgacagatttcatgaagtcacactttccaaacaca
tgccttaaggatcagcatttcaacatggtggagtatcatgttccagtgtctgcaggagga
gtagccaatatatttgatctcctggaagccagcaaagcagccttcaatatcaggcacttc
tcagtgagtcaaacaacattagaggaggttttcatcaattttgccaaagatcaagcagac
cctgatggtgtggatgcaggtcccgatgtgacactggacagctctgacacgagtagccac
gatagcaccataagttccatctattga
DBGET
integrated database retrieval system
