Colius striatus (speckled mousebird): 104556469
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Entry
104556469 CDS
T08355
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104556469 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104556469 (PAN3)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104556469 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104556469 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104556469
NCBI-ProteinID:
XP_010198634
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MTNSSSSPSLLNDSAKQYTGHDPLTSPNSSLINDFAALSMSQRRKLAKPAFPSFITDLED
RYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQ
TPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPANAGLAPGMSLSAGSSP
LHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTY
FYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQ
IDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRI
HGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHF
NDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDP
TKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSG
IQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRN
DVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTE
AGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN
GQL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagcagcagctcccctagccttctcaatgacagtgccaagcagtacacaggc
catgatccactaacttcaccaaactcatctttaattaatgactttgctgccctcagcatg
tctcaaaggaggaagctggcaaaaccagcatttccttcgtttatcactgacttggaggac
agatataatacagtcttgcccaggaagtatcgactggggatgctggatgagaggatagtt
ccggtgggatcaaaagcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgt
aaaacaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacag
acaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagt
aatgtatcccagtcaagtatgtctgccttctctcaagccttgttctctcatccctccatg
ggaagtcctgctaatgctgggctagcaccaggaatgtcactgtcagcaggatcttctcct
cttcattcccccaaaataactcctcatacatctcctgctcctcgaagaagaagtcatact
cctaacccagcaaactatatggtgcctactagtgcctctgcttctgttgctaatgctgtc
tctcagcctccatctactggccaggtgatacagaaggaaacagtgggtggaacaacatac
ttctacactgatacaactccagcacctctcacgggaatggtatttccaaactaccacatt
taccatccagctgcacctcatgttgcatacatgcagccaaaagcaaatgcaccttccttc
ttcatggcagatgagctcagacaggaactgatcaacagacatttaataactatggcccag
attgatcaggctgatattcctgcagttcctgcggaagtggacagctaccacagtctcttt
cctttggaaccactgccaccacccaaccggatacagaaaacaagcaactttgggtacatt
acatcatgctataaagctgtaaatagtaaagatgacctgccgtattgccttcggaggata
catggtttccgtctcgttaacacaaaatgcatggtattggttgacatgtggaaaaaaatt
cagcactcaaatatagtaactttgcgtgaagtgtttaccactaaagcatttggagaacac
tctcttgtgtttgcatatgattttcatgctggaggagagacaatgatgagcagacacttc
aatgaccctagtgctgatgcctatttcaccaaacgaaaatggggtcagcatgacggacct
ctaccgcggcagcatgctggattacttccagagtcattgatatgggcatatattgtgcag
ctcagctctgcgttacggaccattcatacagcaggacttgcgtgccgagtcatggatcca
acaaaaattctagtaacaggcaaaacgaggttacgagttaattgtgttggaatctttgat
gttttgacatttgacaacagccaaaataatccactggcattaatggcgcagtttcagcaa
gcagatctgatctccctggggaaagttgtgttggctttggcttgcaattctttatcagga
attcagagagagaacttgcagaaagcaatggaattagtgacaatcaactattcctctgat
ctgaagaatctgattttgtatttgctgaccgaccaaaacaggcttcgcagtgtaaatgat
atcatgcctatgattggtgcacgattctatactcagttggatgctgctcaaatgcgaaat
gatgtcatagaggaagaccttgcaaaggaggtgcagaatggaaggttgtttaggcttcta
gcaaaactgggaacaatcaatgagaggccagagtttcagaaggacccaacgtggtcagaa
actggagacaggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaa
gcgggtactccttggattgacctcagtcacattatctcatgtcttaacaagttagatgct
ggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaact
tacagcgatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaat
ggtcagttgtag
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