KEGG   Colius striatus (speckled mousebird): 104556681
Entry
104556681         CDS       T08355                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104556681 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csti03041]
    104556681 (CDC40)
Spliceosome [BR:csti03041]
 Complex C
  Other components
   Step II factors
    104556681 (CDC40)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st DSE1_N Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 ASA1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR41 PAC11 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NOL10_N WDR90_beta-prop_4th TRM82_WD CFAP251_N Beta-prop_ACSF4 Beta-prop_NWD2_C UCP007778 WD_LRWD1 YJR039W_M Beta-prop_Vps41 PQQ_2
Other DBs
NCBI-GeneID: 104556681
NCBI-ProteinID: XP_010198948
LinkDB
Position
Unknown
AA seq 516 aa
EDVETGVHLDPSIKEVQYNPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDF
MFEQQRRTFATYGYALDPSIDNPEVSTKYIGSVEEAEKNQGLTVFETGQRKIEKRKKFKE
NDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKTILHV
KEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHI
LLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKLWDTET
GQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNT
IVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDN
QILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLY
SRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1551 nt   +upstreamnt  +downstreamnt
gaagatgtggaaacaggagtccatcttgatccttctatcaaggaagttcaatacaatccc
acttatgataccatgtttgcccctgagtttggaccagaaaacccatttaggactcaacaa
atggctgcacctagaaatatgctttctggatatgcagaaccagctcatatcaatgatttc
atgtttgaacaacaaagaagaacatttgcaacctatggttatgcattagatccctctata
gataaccctgaagtttctaccaaatatattggttctgtagaagaagctgaaaaaaatcaa
ggtttgacagtgtttgaaacaggacaaaggaaaattgaaaaaaggaagaaattcaaggag
aacgatgcatctaatattgatggttttctgggaccatgggcaaagtacgttgatgaaaaa
gaagtagccaaaccatcagaggaagaacagaaagagttggatgaaataacggcgaagagg
cagaagagaggaaaactggaagatgataaacctggagaggagaagactatattacatgtt
aaggaaatgtatgactatcaggggagatcttatcttcacgtccctcaagatgttggagtt
aatcttcgttctacagtgccacctgagaagtgctatcttccaaagaagcaaattcatgta
tggtctggacatacaaagggtgtcagtgcggttagattgtttcctctctctgggcatata
ttgttgtcatgctctatggattgcaaaattaagctgtgggaagtatatggtgatcgaaga
tgtctacgaacgtttattggacatagtaaagctgttcgagacatctgctttaataatgct
ggcactcagtttcttagtgctgcatatgaccgctatcttaaactctgggacactgaaaca
gggcaatgtatttcaagattcacaaacaggaaagttccttattgtgtcaagttcaatcct
gacgaagacaagcaaaatctctttgttgctggaatgtcagataagaaaattgtgcagtgg
gatattcgaagtggtgagattgtgcaggaatatgataggcatttgggagctgtcaacacc
attgtgtttgtggatgaaaatagaaggtttgtgagtacatccgatgacaagagtttgaga
gtctgggaatgggacattcctgtagacttcaagtacatagctgagccaagcatgcattcg
atgccagccgtgactttgtctccaaatgggaaatggttagcttgccagtcgatggataac
caaattctgatctttggagctcagaacagattcagattaaacaaaaagaaaattttcaaa
ggtcacatggtagctggctacgcttgtcaagtggatttttcacctgacatgagctatgtg
atatccggagatgcagatggcaaacttaacatctgggactggaagacaacaaaactctac
agcagattaaaagcccatgacaaagtctgcatcggcgcagtgtggcatccccacgaaaca
tccaaagtcatcacgtgcggctgggacggtctgattaaactgtgggactaa

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